RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 ARL14EPQ8N8R7 260 aaPredicted RBP9.55□□□□□ -0.88
CHD9-219ENST00000569225 ELSPBP1Q96BH3 223 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 TRIM11Q96F44 468 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 CCDC42Q96M95 316 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 PANX2Q96RD6 677 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 CCSER2Q9H7U1 834 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 NMUR1Q9HB89 426 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 TDP1Q9NUW8 608 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 LIMD1Q9UGP4 676 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 DNMT3LQ9UJW3 386 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 ARHGAP26Q9UNA1 814 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 REV3LO60673 3130 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 SSU72P8A0A1W2PR75 194 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 DDX3XO00571 662 aaKnown RBP eCLIP9.55□□□□□ -0.88
CHD9-219ENST00000569225 NRG2O14511 850 aaPredicted RBP9.55□□□□□ -0.88
CHD9-219ENST00000569225 COCHO43405 550 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 OLFML1Q6UWY5 402 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 FAM183BPQ6ZVS7 135 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 SLC26A9Q7LBE3 791 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 BHLHA9Q7RTU4 235 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 YAF2Q8IY57 180 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 TC2NQ8N9U0 490 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 SLC30A5Q8TAD4 765 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 DEPDC1BQ8WUY9 529 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 NDRG1Q92597 394 aaKnown RBP9.55□□□□□ -0.88
CHD9-219ENST00000569225 VCPIP1Q96JH7 1222 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 UHRF1Q96T88 793 aaPredicted RBP9.55□□□□□ -0.88
CHD9-219ENST00000569225 C11orf70Q9BRQ4 267 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 POPDC2Q9HBU9 364 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 THG1LQ9NWX6 298 aaKnown RBP9.55□□□□□ -0.88
CHD9-219ENST00000569225 ARHGAP20Q9P2F6 1191 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 ADAMTS1Q9UHI8 967 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 NUMBLQ9Y6R0 609 aa9.55□□□□□ -0.88
CHD9-219ENST00000569225 PTPRDP23468 1912 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 ANKRD62A6NC57 917 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 AKR1B10O60218 316 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 RTN2O75298 545 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 PRAMEF12O95522 483 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 MYBL1P10243 752 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 NCAM1P13591 858 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 EIF4A3P38919 411 aaKnown RBP9.54□□□□□ -0.88
CHD9-219ENST00000569225 PGFP49763 221 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 KPNA1P52294 538 aaPredicted RBP9.54□□□□□ -0.88
CHD9-219ENST00000569225 GSDMDP57764 484 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 MAPK8IP2Q13387 824 aaPredicted RBP9.54□□□□□ -0.88
CHD9-219ENST00000569225 FAM102AQ5T9C2 384 aaPredicted RBP9.54□□□□□ -0.88
CHD9-219ENST00000569225 CC2D1AQ6P1N0 951 aaPredicted RBP9.54□□□□□ -0.88
CHD9-219ENST00000569225 WDR59Q6PJI9 974 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 PARM1Q6UWI2 310 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 XYLT1Q86Y38 959 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 KIAA1958Q8N8K9 716 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 SPC24Q8NBT2 197 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 CLEC4CQ8WTT0 213 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 EDEM1Q92611 657 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 USP13Q92995 863 aaPredicted RBP9.54□□□□□ -0.88
CHD9-219ENST00000569225 CYP2S1Q96SQ9 504 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 KXD1Q9BQD3 176 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 KCNK12Q9HB15 430 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 TMEM51Q9NW97 253 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 OSER1Q9NX31 292 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 MARCH2Q9P0N8 246 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 TJP2Q9UDY2 1190 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 RASAL2Q9UJF2 1139 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 CPQQ9Y646 472 aa9.54□□□□□ -0.88
CHD9-219ENST00000569225 HEPACAM2A8MVW5 462 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 TMCO5BA8MYB1 307 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 GOLGA8SH3BPF8 625 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 DAB1O75553 588 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 FTLP02792 175 aaPredicted RBP9.53□□□□□ -0.88
CHD9-219ENST00000569225 PLEKP08567 350 aaPredicted RBP9.53□□□□□ -0.88
CHD9-219ENST00000569225 TCF3P15923 654 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 PSMC3P17980 439 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 FCARP24071 287 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 VIPR2P41587 438 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 COG7P83436 770 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 EFEMP1Q12805 493 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 TDGQ13569 410 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 GSE1Q14687 1217 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 TANGO2Q6ICL3 276 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 MSANTD2Q6P1R3 559 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 DNAJC24Q6P3W2 148 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 MON1BQ7L1V2 547 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 MIB1Q86YT6 1006 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 MCOLN2Q8IZK6 566 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 BPIFB1Q8TDL5 484 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 SH3RF2Q8TEC5 729 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 FGF14Q92915 247 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 SLC2A13Q96QE2 648 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 SLC22A12Q96S37 553 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 RNF38Q9H0F5 515 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 SMG9Q9H0W8 520 aaKnown RBP9.53□□□□□ -0.88
CHD9-219ENST00000569225 NHEJ1Q9H9Q4 299 aaPredicted RBP9.53□□□□□ -0.88
CHD9-219ENST00000569225 SMPD4Q9NXE4 827 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 RRN3Q9NYV6 651 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 LSM7Q9UK45 103 aaKnown RBP9.53□□□□□ -0.88
CHD9-219ENST00000569225 STAP1Q9ULZ2 295 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 HBS1LQ9Y450 684 aaKnown RBP9.53□□□□□ -0.88
CHD9-219ENST00000569225 XIRP2A4UGR9 3374 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 COL6A3P12111 3177 aa9.53□□□□□ -0.88
CHD9-219ENST00000569225 EYSQ5T1H1 3165 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms