RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 ANO2Q9NQ90 1003 aa12□□□□□ -0.49
CDH3-208ENST00000569036 ADAMTS1Q9UHI8 967 aa12□□□□□ -0.49
CDH3-208ENST00000569036 ZBTB32Q9Y2Y4 487 aaPredicted RBP12□□□□□ -0.49
CDH3-208ENST00000569036 CSMD1Q96PZ7 3565 aa12□□□□□ -0.49
CDH3-208ENST00000569036 SETD2Q9BYW2 2564 aaPredicted RBP12□□□□□ -0.49
CDH3-208ENST00000569036 ZFHX3Q15911 3703 aa12□□□□□ -0.49
CDH3-208ENST00000569036 ESPNB1AK53 854 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 DEXIO95424 95 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 ABCB4P21439 1286 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 CCT2P78371 535 aaKnown RBP11.99□□□□□ -0.49
CDH3-208ENST00000569036 MCL1Q07820 350 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 SSRP1Q08945 709 aaKnown RBP11.99□□□□□ -0.49
CDH3-208ENST00000569036 STARD3Q14849 445 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 SHBQ15464 509 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 CCDC142Q17RM4 750 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 ANO4Q32M45 955 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 ADAT2Q7Z6V5 191 aaKnown RBP11.99□□□□□ -0.49
CDH3-208ENST00000569036 FAM124AQ86V42 546 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 DDX42Q86XP3 938 aaKnown RBP eCLIP11.99□□□□□ -0.49
CDH3-208ENST00000569036 TMEM25Q86YD3 366 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 SCFD1Q8WVM8 642 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 OTUB2Q96DC9 234 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 TRIM44Q96DX7 344 aaPredicted RBP11.99□□□□□ -0.49
CDH3-208ENST00000569036 SIPA1Q96FS4 1042 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 MMS19Q96T76 1030 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 ELF4Q99607 663 aaPredicted RBP11.99□□□□□ -0.49
CDH3-208ENST00000569036 HAPLN2Q9GZV7 340 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 LRRC4CQ9HCJ2 640 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 SPHK2Q9NRA0 654 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 THSD1Q9NS62 852 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 DNAJC17Q9NVM6 304 aaKnown RBP11.99□□□□□ -0.49
CDH3-208ENST00000569036 TRPM5Q9NZQ8 1165 aa11.99□□□□□ -0.49
CDH3-208ENST00000569036 OAS1P00973 400 aaKnown RBP11.98□□□□□ -0.49
CDH3-208ENST00000569036 FAM87AP0C7U9 286 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 CKMT2P17540 419 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 LSSP48449 732 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 USP46P62068 366 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 SKOR1P84550 965 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 FOXK1P85037 733 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 PDIA5Q14554 519 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 ENOX2Q16206 610 aaKnown RBP11.98□□□□□ -0.49
CDH3-208ENST00000569036 ARL13BQ3SXY8 428 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 JADE1Q6IE81 842 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 CACUL1Q86Y37 369 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 TMPRSS6Q8IU80 811 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 SCN4BQ8IWT1 228 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 ANP32BQ92688 251 aaKnown RBP11.98□□□□□ -0.49
CDH3-208ENST00000569036 PKMYT1Q99640 499 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 ARHGAP9Q9BRR9 750 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 ESYT1Q9BSJ8 1104 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 CCSER1Q9C0I3 900 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 POLR1BQ9H9Y6 1135 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 KMT5AQ9NQR1 393 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 PLEKHB1Q9UF11 243 aaPredicted RBP11.98□□□□□ -0.49
CDH3-208ENST00000569036 STON1Q9Y6Q2 735 aa11.98□□□□□ -0.49
CDH3-208ENST00000569036 ZNF840PA6NDX5 716 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 CLDN3O15551 220 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 HMGB1P09429 215 aaKnown RBP11.97□□□□□ -0.49
CDH3-208ENST00000569036 TAF6P49848 677 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 C21orf59P57076 290 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 ST3GAL1Q11201 340 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 TSGA10IPQ3SY00 556 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 CFAP221Q4G0U5 840 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 BBS7Q8IWZ6 715 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 DAW1Q8N136 415 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 PRCCQ92733 491 aaPredicted RBP11.97□□□□□ -0.49
CDH3-208ENST00000569036 EXTL1Q92935 676 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 BIRC7Q96CA5 298 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 PPP1R9BQ96SB3 815 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 TSPAN18Q96SJ8 248 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 SEMA3CQ99985 751 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 ORAI3Q9BRQ5 295 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 OTOGQ6ZRI0 2925 aa11.97□□□□□ -0.49
CDH3-208ENST00000569036 VILLO15195 856 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 SLC16A4O15374 487 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 CACNG3O60359 315 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 USP12O75317 370 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 ADRB2P07550 413 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 MBL2P11226 248 aaPredicted RBP11.96□□□□□ -0.49
CDH3-208ENST00000569036 ACADMP11310 421 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 ACP1P24666 158 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 ACAT1P24752 427 aaKnown RBP11.96□□□□□ -0.49
CDH3-208ENST00000569036 CD27P26842 260 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 EPHA8P29322 1005 aaPredicted RBP11.96□□□□□ -0.49
CDH3-208ENST00000569036 PDIA3P30101 505 aaKnown RBP11.96□□□□□ -0.49
CDH3-208ENST00000569036 ACSL1P33121 698 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 MATR3P43243 847 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDH3-208ENST00000569036 AFMP43652 599 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 COPAP53621 1224 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 IGFBP7Q16270 282 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 INTS6LQ5JSJ4 861 aaKnown RBP11.96□□□□□ -0.49
CDH3-208ENST00000569036 NAP1L5Q96NT1 182 aaPredicted RBP11.96□□□□□ -0.49
CDH3-208ENST00000569036 ACE2Q9BYF1 805 aaPredicted RBP11.96□□□□□ -0.49
CDH3-208ENST00000569036 TRIM9Q9C026 710 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 EPN3Q9H201 632 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 BHMT2Q9H2M3 363 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 GTF3C4Q9UKN8 822 aa11.96□□□□□ -0.49
CDH3-208ENST00000569036 SPENQ96T58 3664 aaKnown RBP11.96□□□□□ -0.5
CDH3-208ENST00000569036 YKT6O15498 198 aa11.95□□□□□ -0.5
CDH3-208ENST00000569036 FAM189A1O60320 539 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms