RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.2■□□□□ 0.02
CMTM3-215ENST00000568477 POLR3BQ9NW08 1133 aaPredicted RBP15.2■□□□□ 0.02
CMTM3-215ENST00000568477 OSER1Q9NX31 292 aa15.2■□□□□ 0.02
CMTM3-215ENST00000568477 DNMT3LQ9UJW3 386 aa15.2■□□□□ 0.02
CMTM3-215ENST00000568477 USP3Q9Y6I4 520 aa15.2■□□□□ 0.02
CMTM3-215ENST00000568477 SDK1Q7Z5N4 2213 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 K7EQS6 105 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 P4HA2O15460 535 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 HOXC11O43248 304 aaPredicted RBP15.19■□□□□ 0.02
CMTM3-215ENST00000568477 KAT7O95251 611 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 GNA14O95837 355 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 APODP05090 189 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 RETP07949 1114 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 RALAP11233 206 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 CD19P15391 556 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 ID4P47928 161 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 SLC6A11P48066 632 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 SEC13P55735 322 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 STX17P56962 302 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 GOLGA7BQ2TAP0 167 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 C2orf27AQ580R0 203 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 HTR3DQ70Z44 454 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 SCD5Q86SK9 330 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 PIGZQ86VD9 579 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 ARHGAP18Q8N392 663 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 TRIML1Q8N9V2 468 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 WBP2Q969T9 261 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 CDK5RAP1Q96SZ6 601 aaKnown RBP15.19■□□□□ 0.02
CMTM3-215ENST00000568477 ARHGEF4Q9NR80 690 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 SPHK2Q9NRA0 654 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 CLIC5Q9NZA1 410 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 HESX1Q9UBX0 185 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 NUDT5Q9UKK9 219 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 MYOFQ9NZM1 2061 aa15.19■□□□□ 0.02
CMTM3-215ENST00000568477 MDM4O15151 490 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 AXIN1O15169 862 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 RPP40O75818 363 aaKnown RBP15.18■□□□□ 0.02
CMTM3-215ENST00000568477 APBB3O95704 486 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 GRIA2P42262 883 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 PLA2G4AP47712 749 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 BCAT1P54687 386 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 KDSRQ06136 332 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 C12orf40Q86WS4 652 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 TTC30AQ86WT1 665 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 PPM1KQ8N3J5 372 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 ZNF276Q8N554 614 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 UBR7Q8N806 425 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 GAB3Q8WWW8 586 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 TSPAN16Q9UKR8 245 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 KIAA1257Q9ULG3 409 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 USP18Q9UMW8 372 aa15.18■□□□□ 0.02
CMTM3-215ENST00000568477 CACNA1AO00555 2505 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 XPO1O14980 1071 aaKnown RBP15.17■□□□□ 0.02
CMTM3-215ENST00000568477 GREM1O60565 184 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 FGFR1OPO95684 399 aaKnown RBP15.17■□□□□ 0.02
CMTM3-215ENST00000568477 CCDC192P0DO97 292 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 VDRP11473 427 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 TKTL1P51854 596 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 MARSP56192 900 aaKnown RBP15.17■□□□□ 0.02
CMTM3-215ENST00000568477 MRPS21P82921 87 aaKnown RBP15.17■□□□□ 0.02
CMTM3-215ENST00000568477 PDE4CQ08493 712 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 MESP2Q0VG99 397 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 BST2Q10589 180 aaKnown RBP15.17■□□□□ 0.02
CMTM3-215ENST00000568477 KLHL40Q2TBA0 621 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 ANO4Q32M45 955 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 PREPLQ4J6C6 727 aaPredicted RBP15.17■□□□□ 0.02
CMTM3-215ENST00000568477 RAB41Q5JT25 222 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 TMEM25Q86YD3 366 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 MIB1Q86YT6 1006 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 TRIM59Q8IWR1 403 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 ETFBKMTQ8IXQ9 262 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 TSTD1Q8NFU3 115 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 SRRTQ9BXP5 876 aaKnown RBP15.17■□□□□ 0.02
CMTM3-215ENST00000568477 KIAA1468Q9P260 1216 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 DEC1Q9P2X7 70 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 RASAL2Q9UJF2 1139 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 MMP17Q9ULZ9 603 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 PCDHB4Q9Y5E5 795 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 SPAG17Q6Q759 2223 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 KIAA1549LQ6ZVL6 1849 aa15.17■□□□□ 0.02
CMTM3-215ENST00000568477 O00370 1275 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 LRP3O75074 770 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 TULP3O75386 442 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 AFPP02771 609 aaKnown RBP15.16■□□□□ 0.02
CMTM3-215ENST00000568477 PAEPP09466 180 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 SETSIPP0DME0 302 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 TNFRSF4P43489 277 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 YWHAGP61981 247 aaKnown RBP eCLIP15.16■□□□□ 0.02
CMTM3-215ENST00000568477 LMNB2Q03252 620 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 SPEM2Q0P670 501 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 KCNH2Q12809 1159 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 GSE1Q14687 1217 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 CAMK4Q16566 473 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 HSF5Q4G112 596 aaPredicted RBP15.16■□□□□ 0.02
CMTM3-215ENST00000568477 TMEM270Q6UE05 265 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 RSRC2Q7L4I2 434 aaKnown RBP15.16■□□□□ 0.02
CMTM3-215ENST00000568477 CACNA2D4Q7Z3S7 1137 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 SFTPA1Q8IWL2 248 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 CCDC33Q8N5R6 958 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 FAM160A2Q8N612 972 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms