RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 REM2Q8IYK8 340 aaPredicted RBP17.44■□□□□ 0.38
CMTM3-213ENST00000566756 EMC1Q8N766 993 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 FAM13CQ8NE31 585 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 CXorf38Q8TB03 319 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 ZBTB10Q96DT7 871 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 MRRFQ96E11 262 aaKnown RBP17.44■□□□□ 0.38
CMTM3-213ENST00000566756 ADPGKQ9BRR6 497 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 ZNF180Q9UJW8 692 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 MTO1Q9Y2Z2 717 aaKnown RBP17.44■□□□□ 0.38
CMTM3-213ENST00000566756 A0A087WZ62 844 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 ZNF487B1APH4 448 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 LPXNO60711 386 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 ECM2O94769 699 aaPredicted RBP17.44■□□□□ 0.38
CMTM3-213ENST00000566756 TOMM70O94826 608 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 INHBAP08476 426 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 RPSAP08865 295 aaKnown RBP17.44■□□□□ 0.38
CMTM3-213ENST00000566756 MCF2P10911 925 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 GNAZP19086 355 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 ELK3P41970 407 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 RAP1GAPP47736 663 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 PTK7Q13308 1070 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 EEF1DP3Q658K8 133 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 MAP7D3Q8IWC1 876 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 STK32AQ8WU08 396 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 FDXACB1Q9BRP7 624 aaPredicted RBP17.44■□□□□ 0.38
CMTM3-213ENST00000566756 TSSK1BQ9BXA7 367 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 ELOVL4Q9GZR5 314 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 MINDY3Q9H8M7 445 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 NPHS2Q9NP85 383 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 PCSK1NQ9UHG2 260 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 AKT3Q9Y243 479 aa17.44■□□□□ 0.38
CMTM3-213ENST00000566756 TCRBV9S1A1TA0A576 114 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 C2CD4BA6NLJ0 364 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 HAS3O00219 553 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 DPYSL4O14531 572 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 TRDMT1O14717 391 aaKnown RBP17.43■□□□□ 0.38
CMTM3-213ENST00000566756 HGSO14964 777 aaPredicted RBP17.43■□□□□ 0.38
CMTM3-213ENST00000566756 PEX11AO75192 247 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 LUC7L3O95232 432 aaKnown RBP17.43■□□□□ 0.38
CMTM3-213ENST00000566756 KRT19P08727 400 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 CXCL8P10145 99 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 TGM2P21980 687 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 INCA1Q0VD86 236 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 STILQ15468 1287 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 AMHR2Q16671 573 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 ANKRD20A2Q5SQ80 823 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 ANKRD20A1Q5TYW2 823 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 ANKRD20A3Q5VUR7 823 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 DARS2Q6PI48 645 aaKnown RBP17.43■□□□□ 0.38
CMTM3-213ENST00000566756 CYP4V2Q6ZWL3 525 aaPredicted RBP17.43■□□□□ 0.38
CMTM3-213ENST00000566756 TEKT4Q8WW24 435 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 HSPH1Q92598 858 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 LRRC39Q96DD0 335 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 THOC1Q96FV9 657 aaKnown RBP17.43■□□□□ 0.38
CMTM3-213ENST00000566756 CALN1Q9BXU9 219 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 AP5M1Q9H0R1 490 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 C10orf88Q9H8K7 445 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 MKS1Q9NXB0 559 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 DONSONQ9NYP3 566 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 CNTN3Q9P232 1028 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 CHMP2BQ9UQN3 213 aa17.43■□□□□ 0.38
CMTM3-213ENST00000566756 M0QYV0 167 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 CCDC22O60826 627 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 IQCF3P0C7M6 154 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 AKR1A1P14550 325 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 PSMC4P43686 418 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 PRKD1Q15139 912 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-213ENST00000566756 BOLA3Q53S33 107 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 PLEKHG4Q58EX7 1191 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 FAM102AQ5T9C2 384 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-213ENST00000566756 LONP2Q86WA8 852 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 SLC26A11Q86WA9 606 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 TRIM42Q8IWZ5 723 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 ZNF570Q96NI8 536 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 RNF157Q96PX1 679 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 TWNKQ96RR1 684 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 SMYD3Q9H7B4 428 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 KANSL3Q9P2N6 904 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 SLC17A7Q9P2U7 560 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 LRRC42Q9Y546 428 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 MBLAC1A4D2B0 266 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-213ENST00000566756 KBTBD13C9JR72 458 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 NFICP08651 508 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 IBSPP21815 317 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-213ENST00000566756 CDH6P55285 790 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 CDH8P55286 799 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 KRT72Q14CN4 511 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 TTC39BQ5VTQ0 682 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-213ENST00000566756 LCLAT1Q6UWP7 414 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 MTDHQ86UE4 582 aaKnown RBP17.42■□□□□ 0.38
CMTM3-213ENST00000566756 NT5DC4Q86YG4 428 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 CEP120Q8N960 986 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 PEBP4Q96S96 227 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 TBCBQ99426 244 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 USP29Q9HBJ7 922 aa17.42■□□□□ 0.38
CMTM3-213ENST00000566756 BARX2Q9UMQ3 279 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-213ENST00000566756 SMIM35A0A1B0GVV1 85 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 BCLAF3A2AJT9 711 aaKnown RBP17.41■□□□□ 0.38
CMTM3-213ENST00000566756 LACTBL1A8MY62 500 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 B4GALT5O43286 388 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms