RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 KLC1Q07866 573 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 ACAP1Q15027 740 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 TRNP1Q6NT89 227 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 EFCAB12Q6NXP0 572 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 FAM183BPQ6ZVS7 135 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 NUDCD3Q8IVD9 361 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 C12orf29Q8N999 325 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 USP29Q9HBJ7 922 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 ZNF112Q9UJU3 913 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 TTLL3Q9Y4R7 772 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.79□□□□□ -0.04
CDH1-209ENST00000566510 GPR25O00155 361 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 ARIH2O95376 493 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 PSMG1O95456 288 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 STAG3L1P0CL83 205 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 MXRA7P84157 204 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 TREML2Q5T2D2 321 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 MAP1SQ66K74 1059 aaPredicted RBP14.79□□□□□ -0.04
CDH1-209ENST00000566510 TMEM154Q6P9G4 183 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 SMC1BQ8NDV3 1235 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 SH3TC2Q8TF17 1288 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 BTBD7Q9P203 1132 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 PLLPQ9Y342 182 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 ANK1P16157 1881 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 ZBTB42B2RXF5 422 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 APOL1O14791 398 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 TBX10O75333 385 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 LINGO3P0C6S8 592 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 IQCF3P0C7M6 154 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 ACADSP16219 412 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 ALDH18A1P54886 795 aaKnown RBP14.79□□□□□ -0.04
CDH1-209ENST00000566510 AQP5P55064 265 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 ZCCHC23Q6ZST2 131 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 NDUFAF2Q8N183 169 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 HPDLQ96IR7 371 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 PPP1R12CQ9BZL4 782 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 PTPRHQ9HD43 1115 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 ETNK2Q9NVF9 386 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 CNTN3Q9P232 1028 aa14.79□□□□□ -0.04
CDH1-209ENST00000566510 A6NHS1 94 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 C2CD4BA6NLJ0 364 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 IL18RAPO95256 599 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 PGK2P07205 417 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 PROZP22891 400 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 RPS12P25398 132 aaKnown RBP14.78□□□□□ -0.04
CDH1-209ENST00000566510 PSEN1P49768 467 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 NDST1P52848 882 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 MRPS35P82673 323 aaKnown RBP14.78□□□□□ -0.04
CDH1-209ENST00000566510 MRPS5P82675 430 aaKnown RBP14.78□□□□□ -0.04
CDH1-209ENST00000566510 SLC34A1Q06495 639 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 KRT72Q14CN4 511 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 ATG16L1Q676U5 607 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 LRRC74BQ6ZQY2 392 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 CYP4V2Q6ZWL3 525 aaPredicted RBP14.78□□□□□ -0.04
CDH1-209ENST00000566510 CAND1Q86VP6 1230 aaKnown RBP14.78□□□□□ -0.04
CDH1-209ENST00000566510 FBXO27Q8NI29 283 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 PPP1R14CQ8TAE6 165 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 NRG4Q8WWG1 115 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 CPB2Q96IY4 423 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 ZNF333Q96JL9 665 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 SPATA33Q96N06 139 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 POPDC2Q9HBU9 364 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 SMYD2Q9NRG4 433 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 TSPAN16Q9UKR8 245 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 TOP3BO95985 862 aaKnown RBP14.78□□□□□ -0.04
CDH1-209ENST00000566510 RARBP10826 455 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 VDRP11473 427 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 P4HA1P13674 534 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 GABRB2P47870 512 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 TUBP50607 506 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 SMAD1Q15797 465 aaKnown RBP14.78□□□□□ -0.04
CDH1-209ENST00000566510 TRMT10BQ6PF06 316 aaKnown RBP14.78□□□□□ -0.04
CDH1-209ENST00000566510 ARHGAP24Q8N264 748 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 PPFIBP2Q8ND30 876 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 FAM172AQ8WUF8 416 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 KLRG1Q96E93 195 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 FZD8Q9H461 694 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 DLGAP2Q9P1A6 1054 aa14.78□□□□□ -0.04
CDH1-209ENST00000566510 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.77□□□□□ -0.04
CDH1-209ENST00000566510 KRT38O76015 456 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 APOEP02649 317 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 CSH1P0DML2 217 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 CSH2P0DML3 217 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 AMPD1P23109 780 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 CA9Q16790 459 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 DALRD3Q5D0E6 543 aaKnown RBP14.77□□□□□ -0.04
CDH1-209ENST00000566510 CASC4Q6P4E1 433 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 TREML1Q86YW5 311 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 CRLF3Q8IUI8 442 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 SCUBE3Q8IX30 993 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 UCMAQ8WVF2 138 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 CLPTM1LQ96KA5 538 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 GPR20Q99678 358 aa14.77□□□□□ -0.04
CDH1-209ENST00000566510 SLC15A5A6NIM6 579 aa14.77□□□□□ -0.05
CDH1-209ENST00000566510 RFPL1O75677 317 aa14.77□□□□□ -0.05
CDH1-209ENST00000566510 TGFB3P10600 412 aa14.77□□□□□ -0.05
CDH1-209ENST00000566510 SKIP12755 728 aa14.77□□□□□ -0.05
CDH1-209ENST00000566510 CCDC14Q49A88 953 aa14.77□□□□□ -0.05
CDH1-209ENST00000566510 UNC5AQ6ZN44 842 aa14.77□□□□□ -0.05
CDH1-209ENST00000566510 TRIM42Q8IWZ5 723 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms