RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ABCC13Q9NSE7 274 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 OLA1Q9NTK5 396 aaKnown RBP22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 DNMT3LQ9UJW3 386 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 ZNF318Q5VUA4 2279 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 E5RJQ4 531 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 CBFA2T2O43439 604 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 C10orf120Q5SQS8 335 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 BSPRYQ5W0U4 402 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 CC2D1AQ6P1N0 951 aaPredicted RBP22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 BEND5Q7L4P6 421 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 C1orf131Q8NDD1 294 aaKnown RBP22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 PPP1R13BQ96KQ4 1090 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 CPXM1Q96SM3 734 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 TRIM62Q9BVG3 475 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 XPO4Q9C0E2 1151 aaKnown RBP22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 PDCL3Q9H2J4 239 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 SMPD4Q9NXE4 827 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 ITIH6Q6UXX5 1313 aa22.08■■□□□ 1.13
SHCBP1-205ENST00000566016 A0A1W2PQJ5 194 aa22.08■■□□□ 1.12
SHCBP1-205ENST00000566016 TBX18O95935 607 aa22.08■■□□□ 1.12
SHCBP1-205ENST00000566016 GLULP15104 373 aa22.08■■□□□ 1.12
SHCBP1-205ENST00000566016 FERP16591 822 aa22.08■■□□□ 1.12
SHCBP1-205ENST00000566016 PRKCQQ04759 706 aa22.08■■□□□ 1.12
SHCBP1-205ENST00000566016 GOLGA8FQ08AF8 430 aa22.08■■□□□ 1.12
SHCBP1-205ENST00000566016 GOLGA8DPQ0D2H9 430 aa22.08■■□□□ 1.12
SHCBP1-205ENST00000566016 PDGFRLQ15198 375 aa22.08■■□□□ 1.12
SHCBP1-205ENST00000566016 BTBD8Q5XKL5 378 aa22.08■■□□□ 1.12
SHCBP1-205ENST00000566016 TRIM72Q6ZMU5 477 aa22.08■■□□□ 1.12
SHCBP1-205ENST00000566016 OSCP1Q8WVF1 389 aa22.08■■□□□ 1.12
SHCBP1-205ENST00000566016 COL4A3Q01955 1670 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 E2F8A0AVK6 867 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 PAPSS1O43252 624 aaPredicted RBP22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 LTFP02788 710 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 MMEP08473 750 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 NOMO3P69849 1222 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 MLF2Q15773 248 aaPredicted RBP22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 PTPN20Q4JDL3 420 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 TAF3Q5VWG9 929 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 RSRC2Q7L4I2 434 aaKnown RBP22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 SCUBE3Q8IX30 993 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 SIX5Q8N196 739 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 IPO4Q8TEX9 1081 aaKnown RBP22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 SLC20A1Q8WUM9 679 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 NDRG1Q92597 394 aaKnown RBP22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 GOLGA1Q92805 767 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 MSANTD3Q96H12 275 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 SHDQ96IW2 340 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 KLF16Q9BXK1 252 aaPredicted RBP22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 AIPL1Q9NZN9 384 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 CFAP97Q9P2B7 532 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 MIA3Q5JRA6 1907 aa22.07■■□□□ 1.12
SHCBP1-205ENST00000566016 KRBA1A5PL33 1030 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 LRRC53A6NM62 1247 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 PRR33A8MZF0 331 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 PIK3R2O00459 728 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 SLC9A3R1O14745 358 aaPredicted RBP22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 FMO1Q01740 532 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 SLC44A4Q53GD3 710 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 TMEM31Q5JXX7 168 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 MSANTD2Q6P1R3 559 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 C1orf228Q6PIY5 440 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 SARM1Q6SZW1 724 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 ZDHHC17Q8IUH5 632 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 CLEC4CQ8WTT0 213 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 ATP2A3Q93084 1043 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 ZFYVE19Q96K21 471 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 ANP32EQ9BTT0 268 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 MIS12Q9H081 205 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 NUCKS1Q9H1E3 243 aaKnown RBP22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 GKN1Q9NS71 199 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 STRIP2Q9ULQ0 834 aa22.06■■□□□ 1.12
SHCBP1-205ENST00000566016 CYP1A1P04798 512 aaPredicted RBP22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 GLI1P08151 1106 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 CHRNB2P17787 502 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 STARD6P59095 220 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 COG7P83436 770 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 IRF2BP2Q7Z5L9 587 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 MSANTD4Q8NCY6 345 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 CSGALNACT1Q8TDX6 532 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 RNF139Q8WU17 664 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 OTUB2Q96DC9 234 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 DDX23Q9BUQ8 820 aaKnown RBP22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 ASNSD1Q9NWL6 643 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 DUS2Q9NX74 493 aaKnown RBP22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 MARCH2Q9P0N8 246 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 TBC1D14Q9P2M4 693 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 CA14Q9ULX7 337 aa22.05■■□□□ 1.12
SHCBP1-205ENST00000566016 GABRB2P47870 512 aa22.04■■□□□ 1.12
SHCBP1-205ENST00000566016 ARID5AQ03989 594 aa22.04■■□□□ 1.12
SHCBP1-205ENST00000566016 EML3Q32P44 896 aa22.04■■□□□ 1.12
SHCBP1-205ENST00000566016 HFE2Q6ZVN8 426 aa22.04■■□□□ 1.12
SHCBP1-205ENST00000566016 HPS4Q9NQG7 708 aa22.04■■□□□ 1.12
SHCBP1-205ENST00000566016 HEBP1Q9NRV9 189 aa22.04■■□□□ 1.12
SHCBP1-205ENST00000566016 MYOFQ9NZM1 2061 aa22.04■■□□□ 1.12
SHCBP1-205ENST00000566016 TJP2Q9UDY2 1190 aa22.04■■□□□ 1.12
SHCBP1-205ENST00000566016 NUDT5Q9UKK9 219 aa22.04■■□□□ 1.12
SHCBP1-205ENST00000566016 GREM1O60565 184 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 ERBB2P04626 1255 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 SCNN1AP37088 669 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 PRKCIP41743 596 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms