RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 TFDP3Q5H9I0 405 aa14.02□□□□□ -0.16
CX3CL1-204ENST00000565912 STRA8Q7Z7C7 330 aa14.02□□□□□ -0.16
CX3CL1-204ENST00000565912 CCNJLQ8IV13 435 aa14.02□□□□□ -0.16
CX3CL1-204ENST00000565912 HERC6Q8IVU3 1022 aa14.02□□□□□ -0.16
CX3CL1-204ENST00000565912 CCDC103Q8IW40 242 aa14.02□□□□□ -0.16
CX3CL1-204ENST00000565912 DPF3Q92784 378 aa14.02□□□□□ -0.16
CX3CL1-204ENST00000565912 POP1Q99575 1024 aaKnown RBP14.02□□□□□ -0.16
CX3CL1-204ENST00000565912 EFCAB1Q9HAE3 211 aa14.02□□□□□ -0.16
CX3CL1-204ENST00000565912 GPRC5DQ9NZD1 345 aa14.02□□□□□ -0.16
CX3CL1-204ENST00000565912 AP4E1Q9UPM8 1137 aa14.02□□□□□ -0.16
CX3CL1-204ENST00000565912 CAP2P40123 477 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 MMRN1Q13201 1228 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 LRRC34Q8IZ02 419 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 USP6NLQ92738 828 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 CARD9Q9H257 536 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 UTP6Q9NYH9 597 aaKnown RBP14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 SNX13Q9Y5W8 968 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 NR5A2O00482 541 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 GLP2RO95838 553 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 DLGAP3O95886 979 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 ARP10275 920 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 FGFR1P11362 822 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 ATP6V1B2P21281 511 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 TMC7Q7Z402 723 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 ERGIC2Q96RQ1 377 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 FRMD8P1Q9BZ68 369 aaPredicted RBP14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 SYBUQ9NX95 663 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 CASTOR2A6NHX0 329 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 CKBP12277 381 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 TNNI3P19429 210 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 NPTX2P47972 431 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 GRB10Q13322 594 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 MTSS1LQ765P7 747 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 NT5DC3Q86UY8 548 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 UBP1Q9NZI7 540 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 TRPC4Q9UBN4 977 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 CTNNAL1Q9UBT7 734 aa14.02□□□□□ -0.17
CX3CL1-204ENST00000565912 DIP2BQ9P265 1576 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 FDPSP14324 419 aaKnown RBP14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 SCNN1BP51168 640 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 MAPK7Q13164 816 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 CYLC2Q14093 348 aaPredicted RBP14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 CSHL1Q14406 222 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 COL23A1Q86Y22 540 aaPredicted RBP14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 CASKIN2Q8WXE0 1202 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 GPAMQ9HCL2 828 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 DSEQ9UL01 958 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 TECPR2O15040 1411 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 CYP11B1P15538 503 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 KRT20P35900 424 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 MAPK9P45984 424 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 HSPA13P48723 471 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 PTGISQ16647 500 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 RD3Q7Z3Z2 195 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 PTAR1Q7Z6K3 402 aaPredicted RBP14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 NT5DC4Q86YG4 428 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 ARRDC4Q8NCT1 418 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 CBWD1Q9BRT8 395 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 ADGRE3Q9BY15 652 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 ELOVL6Q9H5J4 265 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 DLGAP2Q9P1A6 1054 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 DRG1Q9Y295 367 aaKnown RBP14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 CEP170BQ9Y4F5 1589 aaPredicted RBP14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 GARTP22102 1010 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 ZNF280DQ6N043 979 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 C3orf20Q8ND61 904 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 PREX1Q8TCU6 1659 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 USP42Q9H9J4 1324 aaKnown RBP14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 STAU1O95793 577 aaKnown RBP14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 VHLP40337 213 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 C11orf63Q6NUN7 778 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 ACOX2Q99424 681 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 CGRRF1Q99675 332 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 STARD7Q9NQZ5 370 aa14.01□□□□□ -0.17
CX3CL1-204ENST00000565912 FBXO21O94952 628 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 YWHAQP27348 245 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 LHX1P48742 406 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 ALDH9A1P49189 494 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 SEL1L3Q68CR1 1132 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 SH3GL3Q99963 347 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 PIF1Q9H611 641 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 ERI2A8K979 691 aaKnown RBP14□□□□□ -0.17
CX3CL1-204ENST00000565912 IFRD1O00458 451 aaPredicted RBP14□□□□□ -0.17
CX3CL1-204ENST00000565912 IRAK1P51617 712 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 PDIA6Q15084 440 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 UNKQ9C0B0 810 aaKnown RBP14□□□□□ -0.17
CX3CL1-204ENST00000565912 USP18Q9UMW8 372 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 DNAJC16Q9Y2G8 782 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 SNX8Q9Y5X2 465 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 A0A087X0T9 212 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 KRT75O95678 551 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 FAM228BP0C875 321 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 ITGB6P18564 788 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 YWHAZP63104 245 aaKnown RBP14□□□□□ -0.17
CX3CL1-204ENST00000565912 TGM3Q08188 693 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 PCSK9Q8NBP7 692 aaKnown RBP14□□□□□ -0.17
CX3CL1-204ENST00000565912 SH3GL2Q99962 352 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 ACTR8Q9H981 624 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 MIEF1Q9NQG6 463 aa14□□□□□ -0.17
CX3CL1-204ENST00000565912 CPA4Q9UI42 421 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms