RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 ARMCX2Q7L311 632 aa15.86■□□□□ 0.13
HERC2-207ENST00000564734 CLNKQ7Z7G1 428 aa15.86■□□□□ 0.13
HERC2-207ENST00000564734 NSMCE1Q8WV22 266 aa15.86■□□□□ 0.13
HERC2-207ENST00000564734 TBC1D10AQ9BXI6 508 aa15.86■□□□□ 0.13
HERC2-207ENST00000564734 CXCL16Q9H2A7 254 aa15.86■□□□□ 0.13
HERC2-207ENST00000564734 CXorf56Q9H5V9 222 aa15.86■□□□□ 0.13
HERC2-207ENST00000564734 MCM3APO60318 1980 aa15.86■□□□□ 0.13
HERC2-207ENST00000564734 COL1A2P08123 1366 aa15.86■□□□□ 0.13
HERC2-207ENST00000564734 TGDSO95455 350 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 TROVE2P10155 538 aaKnown RBP eCLIP15.85■□□□□ 0.134e-17■■■■■ 27.6
HERC2-207ENST00000564734 YWHAGP61981 247 aaKnown RBP eCLIP15.85■□□□□ 0.13
HERC2-207ENST00000564734 SLC6A3Q01959 620 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 OVGP1Q12889 678 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 MTHFD1LQ6UB35 978 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 MTDHQ86UE4 582 aaKnown RBP15.85■□□□□ 0.13
HERC2-207ENST00000564734 LRRC6Q86X45 466 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.85■□□□□ 0.13
HERC2-207ENST00000564734 SLC35F5Q8WV83 523 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 TBCBQ99426 244 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 MRPL45Q9BRJ2 306 aaKnown RBP15.85■□□□□ 0.13
HERC2-207ENST00000564734 SNRNP25Q9BV90 132 aaKnown RBP15.85■□□□□ 0.13
HERC2-207ENST00000564734 ZFP69BQ9UJL9 534 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 ZNF487B1APH4 448 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 INHBAP08476 426 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 PYGBP11216 843 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 PRKCHP24723 683 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 PPIL2Q13356 520 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 SLC26A11Q86WA9 606 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 ANKRD13AQ8IZ07 590 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 FAM13CQ8NE31 585 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 FAM172AQ8WUF8 416 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 ALG13Q9NP73 1137 aaKnown RBP15.85■□□□□ 0.13
HERC2-207ENST00000564734 ETNK2Q9NVF9 386 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 ZNF180Q9UJW8 692 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 PLXNA1Q9UIW2 1896 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 MDM4O15151 490 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 GRM5P41594 1212 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 PAXIP1Q6ZW49 1069 aaPredicted RBP15.85■□□□□ 0.13
HERC2-207ENST00000564734 N4BP2L2Q92802 583 aaPredicted RBP15.85■□□□□ 0.13
HERC2-207ENST00000564734 C16orf70Q9BSU1 422 aa15.85■□□□□ 0.13
HERC2-207ENST00000564734 CXorf49A8MYA2 514 aaPredicted RBP15.84■□□□□ 0.13
HERC2-207ENST00000564734 PAPSS1O43252 624 aaPredicted RBP15.84■□□□□ 0.13
HERC2-207ENST00000564734 CELF2O95319 508 aaKnown RBP15.84■□□□□ 0.13
HERC2-207ENST00000564734 SETSIPP0DME0 302 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 OSBPP22059 807 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 MAGEA3P43357 314 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 GCLCP48506 637 aaPredicted RBP15.84■□□□□ 0.13
HERC2-207ENST00000564734 HDAC4P56524 1084 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 BCAR1P56945 870 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 ZNF449Q6P9G9 518 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 LONP2Q86WA8 852 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 MCUQ8NE86 351 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 SHCBP1Q8NEM2 672 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 PPTC7Q8NI37 304 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 KIF12Q96FN5 646 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 FAM111AQ96PZ2 611 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 ZNF670Q9BS34 389 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 C11orf84Q9BUA3 381 aaPredicted RBP15.84■□□□□ 0.13
HERC2-207ENST00000564734 TSSK1BQ9BXA7 367 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 RBM47A0AV96 593 aaKnown RBP15.84■□□□□ 0.13
HERC2-207ENST00000564734 TRDMT1O14717 391 aaKnown RBP15.84■□□□□ 0.13
HERC2-207ENST00000564734 PTPN4P29074 926 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 TTC39BQ5VTQ0 682 aaPredicted RBP15.84■□□□□ 0.13
HERC2-207ENST00000564734 SCYL2Q6P3W7 929 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 CFAP36Q96G28 342 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 SMYD2Q9NRG4 433 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 IKBKGQ9Y6K9 419 aa15.84■□□□□ 0.13
HERC2-207ENST00000564734 KLF11O14901 512 aa15.83■□□□□ 0.13
HERC2-207ENST00000564734 DNAJC6O75061 913 aa15.83■□□□□ 0.13
HERC2-207ENST00000564734 GM2AP17900 193 aa15.83■□□□□ 0.13
HERC2-207ENST00000564734 GNAZP19086 355 aa15.83■□□□□ 0.13
HERC2-207ENST00000564734 RASSF2P50749 326 aa15.83■□□□□ 0.13
HERC2-207ENST00000564734 ZNF792Q3KQV3 632 aa15.83■□□□□ 0.13
HERC2-207ENST00000564734 MARCH8Q5T0T0 291 aa15.83■□□□□ 0.13
HERC2-207ENST00000564734 CDHR3Q6ZTQ4 885 aa15.83■□□□□ 0.13
HERC2-207ENST00000564734 ZNF534Q76KX8 674 aa15.83■□□□□ 0.13
HERC2-207ENST00000564734 EMID1Q96A84 441 aaPredicted RBP15.83■□□□□ 0.13
HERC2-207ENST00000564734 TRIM55Q9BYV6 548 aa15.83■□□□□ 0.13
HERC2-207ENST00000564734 NKX1-2Q9UD57 310 aaPredicted RBP15.83■□□□□ 0.13
HERC2-207ENST00000564734 DCTN4Q9UJW0 460 aa15.83■□□□□ 0.13
HERC2-207ENST00000564734 HEY1Q9Y5J3 304 aa15.83■□□□□ 0.13
HERC2-207ENST00000564734 DIAPH2O60879 1101 aa15.83■□□□□ 0.12
HERC2-207ENST00000564734 PEX11AO75192 247 aa15.83■□□□□ 0.12
HERC2-207ENST00000564734 DLDP09622 509 aaKnown RBP15.83■□□□□ 0.12
HERC2-207ENST00000564734 TFE3P19532 575 aaPredicted RBP15.83■□□□□ 0.12
HERC2-207ENST00000564734 FAXCQ5TGI0 409 aa15.83■□□□□ 0.12
HERC2-207ENST00000564734 ACOT1Q86TX2 421 aa15.83■□□□□ 0.12
HERC2-207ENST00000564734 SCUBE3Q8IX30 993 aa15.83■□□□□ 0.12
HERC2-207ENST00000564734 GPATCH11Q8N954 259 aa15.83■□□□□ 0.12
HERC2-207ENST00000564734 STK32AQ8WU08 396 aa15.83■□□□□ 0.12
HERC2-207ENST00000564734 SKA1Q96BD8 255 aa15.83■□□□□ 0.12
HERC2-207ENST00000564734 PTCD3Q96EY7 689 aaKnown RBP15.83■□□□□ 0.12
HERC2-207ENST00000564734 NGRNQ9NPE2 291 aaKnown RBP15.83■□□□□ 0.12
HERC2-207ENST00000564734 PPEF2O14830 753 aa15.83■□□□□ 0.12
HERC2-207ENST00000564734 HNRNPCL1O60812 293 aaKnown RBP15.83■□□□□ 0.12
HERC2-207ENST00000564734 ZBED1O96006 694 aa15.83■□□□□ 0.12
HERC2-207ENST00000564734 RPSAP08865 295 aaKnown RBP15.83■□□□□ 0.12
HERC2-207ENST00000564734 ZNF286BP0CG31 522 aa15.83■□□□□ 0.12
HERC2-207ENST00000564734 BGNP21810 368 aa15.83■□□□□ 0.12
HERC2-207ENST00000564734 EPHB2P29323 1055 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms