RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ZNF263O14978 683 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 HSF2BPO75031 334 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 CALCAP01258 141 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 LTFP02788 710 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 MBL2P11226 248 aaPredicted RBP17.49■□□□□ 0.39
RNF40-206ENST00000564260 HNRNPH3P31942 346 aaKnown RBP17.49■□□□□ 0.39
RNF40-206ENST00000564260 VIPR2P41587 438 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 RGS7P49802 495 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 GSCP56915 257 aaPredicted RBP17.49■□□□□ 0.39
RNF40-206ENST00000564260 CENPCQ03188 943 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 MTA1Q13330 715 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 MTF1Q14872 753 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 MSANTD2Q6P1R3 559 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 RSRC2Q7L4I2 434 aaKnown RBP17.49■□□□□ 0.39
RNF40-206ENST00000564260 ERICH1Q86X53 443 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 RNF139Q8WU17 664 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 C18orf8Q96DM3 657 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 MRFAP1L1Q96HT8 127 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 SLC22A12Q96S37 553 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 CPXM1Q96SM3 734 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 AGPAT1Q99943 283 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 KXD1Q9BQD3 176 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 TRIM5Q9C035 493 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 RNF38Q9H0F5 515 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 RBSNQ9H1K0 784 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 SYNCQ9H7C4 482 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 CCSER2Q9H7U1 834 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 POPDC2Q9HBU9 364 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 RRN3Q9NYV6 651 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 WDR35Q9P2L0 1181 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 CYTH4Q9UIA0 394 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 ZNF510Q9Y2H8 683 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 CPQQ9Y646 472 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 DENND4CQ5VZ89 1909 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 OBSL1O75147 1896 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 YJEFN3A6XGL0 299 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 E7ENQ6 273 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 PAPSS1O43252 624 aaPredicted RBP17.48■□□□□ 0.39
RNF40-206ENST00000564260 GABBR2O75899 941 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 GYPCP04921 128 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 MMEP08473 750 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 CFHP08603 1231 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 GZMAP12544 262 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 UNGP13051 313 aaPredicted RBP17.48■□□□□ 0.39
RNF40-206ENST00000564260 MMP8P22894 467 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 NSFP46459 744 aaKnown RBP17.48■□□□□ 0.39
RNF40-206ENST00000564260 YWHAZP63104 245 aaKnown RBP17.48■□□□□ 0.39
RNF40-206ENST00000564260 AMPD2Q01433 879 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 PRKCQQ04759 706 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 C10orf120Q5SQS8 335 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 SLC26A9Q7LBE3 791 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 VPS36Q86VN1 386 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 PASD1Q8IV76 773 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 SH3RF2Q8TEC5 729 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 OSCP1Q8WVF1 389 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 RSAD2Q8WXG1 361 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 SHDQ96IW2 340 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 VCPIP1Q96JH7 1222 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 CYP2S1Q96SQ9 504 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 SYT11Q9BT88 431 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 DCLK3Q9C098 648 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 BRD9Q9H8M2 597 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 OSER1Q9NX31 292 aa17.48■□□□□ 0.39
RNF40-206ENST00000564260 HBS1LQ9Y450 684 aaKnown RBP17.48■□□□□ 0.39
RNF40-206ENST00000564260 ZNF638Q14966 1978 aaKnown RBP17.48■□□□□ 0.39
RNF40-206ENST00000564260 LEFTY2O00292 366 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 ARNTLO00327 626 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 LATS1O95835 1130 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 SERPING1P05155 500 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 CHRNB2P17787 502 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 ARID5AQ03989 594 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 KLHL30Q0D2K2 578 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 CLEC16AQ2KHT3 1053 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 TSR1Q2NL82 804 aaKnown RBP17.47■□□□□ 0.39
RNF40-206ENST00000564260 PTPN20Q4JDL3 420 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 TAF3Q5VWG9 929 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 PHF13Q86YI8 300 aaPredicted RBP17.47■□□□□ 0.39
RNF40-206ENST00000564260 CNGA4Q8IV77 575 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 SCUBE3Q8IX30 993 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 SLC20A1Q8WUM9 679 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 ATP2A3Q93084 1043 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 EXOC4Q96A65 974 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 PLD4Q96BZ4 506 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 ZFRQ96KR1 1074 aaKnown RBP17.47■□□□□ 0.39
RNF40-206ENST00000564260 FAM83CQ9BQN1 747 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 RPP25Q9BUL9 199 aaKnown RBP17.47■□□□□ 0.39
RNF40-206ENST00000564260 KLF16Q9BXK1 252 aaPredicted RBP17.47■□□□□ 0.39
RNF40-206ENST00000564260 IRX2Q9BZI1 471 aaPredicted RBP17.47■□□□□ 0.39
RNF40-206ENST00000564260 MARCH2Q9P0N8 246 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 LSM7Q9UK45 103 aaKnown RBP17.47■□□□□ 0.39
RNF40-206ENST00000564260 CCL26Q9Y258 94 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 MYH10P35580 1976 aa17.47■□□□□ 0.39
RNF40-206ENST00000564260 CALB1P05937 261 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 GDI1P31150 447 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 GPC5P78333 572 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 SLC6A3Q01959 620 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 RING1Q06587 406 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 C1QBPQ07021 282 aaKnown RBP17.46■□□□□ 0.39
RNF40-206ENST00000564260 OLFML1Q6UWY5 402 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 TRIM67Q6ZTA4 783 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms