RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 TBL3Q12788 808 aaKnown RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 Q3C1V9 767 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 TMEM259Q4ZIN3 620 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 MAP3K21Q5TCX8 1036 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 VWA5B1Q5TIE3 1220 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 KCTD6Q8NC69 237 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 ZNF398Q8TD17 642 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 ALKBH8Q96BT7 664 aaKnown RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 FOXP3Q9BZS1 431 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 IMPG2Q9BZV3 1241 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 RPAP3Q9H6T3 665 aaPredicted RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 PIH1D1Q9NWS0 290 aaKnown RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 KCND2Q9NZV8 630 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 ADAMTS6Q9UKP5 1117 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 BLOC1S6Q9UL45 172 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 SMCHD1A6NHR9 2005 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 DCXO43602 365 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 APRTP07741 180 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 ITGB5P18084 799 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 SERPINB5P36952 375 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 RPL5P46777 297 aaKnown RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 PKNOX1P55347 436 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 NAA20P61599 178 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 LRRC71Q8N4P6 559 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 ZNF276Q8N554 614 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 RAB6BQ9NRW1 208 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 RABGEF1Q9UJ41 708 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 MYPNQ86TC9 1320 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 SMIM31A0A1B0GVY4 71 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 TTLL13PA6NNM8 815 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 H3BSA7 217 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 CASQ2O14958 399 aaPredicted RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 ALOX15BO15296 676 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 OATP04181 439 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 DLDP09622 509 aaKnown RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 PSMA2P25787 234 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 UGCGQ16739 394 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 ANKRD20A4Q4UJ75 823 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 SH3D19Q5HYK7 790 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 RARS2Q5T160 578 aaKnown RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 MFSD4BQ5TF39 518 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 GADL1Q6ZQY3 521 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 ZSCAN18Q8TBC5 510 aaPredicted RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 FAM151AQ8WW52 585 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 APOPT1Q96IL0 206 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 DEFB129Q9H1M3 183 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 SEMA6AQ9H2E6 1030 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 AVENQ9NQS1 362 aaPredicted RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 HERC5Q9UII4 1024 aaKnown RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 CLUHO75153 1309 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 TCRBV7S3A2A0A539 114 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 ALDH1A3P47895 512 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 NUDT2P50583 147 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 TRPC3Q13507 836 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 ITPRIPL1Q6GPH6 555 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 C16orf87Q6PH81 154 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 SV2AQ7L0J3 742 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 ZNF554Q86TJ5 538 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 PPIL6Q8IXY8 311 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 SKA1Q96BD8 255 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 PGBD4Q96DM1 585 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 KCNK13Q9HB14 408 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 MCF2LO15068 1137 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 PSTPIP1O43586 416 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 EIF3EP60228 445 aaKnown RBP13.18□□□□□ -0.3
CCDC187-201ENST00000563590 EFHC2Q5JST6 749 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 TXNRD3NBQ6F5E7 133 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 LPCAT2Q7L5N7 544 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 RBM12BQ8IXT5 1001 aaKnown RBP13.18□□□□□ -0.3
CCDC187-201ENST00000563590 KATNAL2Q8IYT4 538 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 TARS2Q9BW92 718 aaKnown RBP13.18□□□□□ -0.3
CCDC187-201ENST00000563590 PAIP1Q9H074 479 aaKnown RBP13.18□□□□□ -0.3
CCDC187-201ENST00000563590 SLC9A2Q9UBY0 812 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 PLA2G4CQ9UP65 541 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 TSC22D4Q9Y3Q8 395 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 STAM2O75886 525 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 DDNO94850 711 aaPredicted RBP13.18□□□□□ -0.3
CCDC187-201ENST00000563590 GPC3P51654 580 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 GDF10P55107 478 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 HDAC4P56524 1084 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 NBPF12Q5TAG4 269 aaPredicted RBP13.18□□□□□ -0.3
CCDC187-201ENST00000563590 UTS2BQ765I0 119 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 RNF169Q8NCN4 708 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 STKLD1Q8NE28 680 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 FAM172AQ8WUF8 416 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 DEPDC1BQ8WUY9 529 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 EME1Q96AY2 570 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 TRIM11Q96F44 468 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 TMEM8AQ9HCN3 771 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 ZC3H7BQ9UGR2 993 aaKnown RBP13.18□□□□□ -0.3
CCDC187-201ENST00000563590 HACL1Q9UJ83 578 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 GOLGA4Q13439 2230 aaKnown RBP13.18□□□□□ -0.3
CCDC187-201ENST00000563590 CENPFP49454 3210 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 BRWD3Q6RI45 1802 aa13.18□□□□□ -0.3
CCDC187-201ENST00000563590 ENTPD3O75355 529 aa13.17□□□□□ -0.3
CCDC187-201ENST00000563590 RBP3P10745 1247 aa13.17□□□□□ -0.3
CCDC187-201ENST00000563590 DSG3P32926 999 aa13.17□□□□□ -0.3
CCDC187-201ENST00000563590 MLH1P40692 756 aa13.17□□□□□ -0.3
CCDC187-201ENST00000563590 GK3PQ14409 553 aa13.17□□□□□ -0.3
CCDC187-201ENST00000563590 RNASEH2BQ5TBB1 312 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms