RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 C12orf40Q86WS4 652 aa15.57■□□□□ 0.08
RPUSD1-204ENST00000563560 DDX42Q86XP3 938 aaKnown RBP eCLIP15.57■□□□□ 0.08
RPUSD1-204ENST00000563560 BBS7Q8IWZ6 715 aa15.57■□□□□ 0.08
RPUSD1-204ENST00000563560 SYNPOQ8N3V7 929 aa15.57■□□□□ 0.08
RPUSD1-204ENST00000563560 SPEM1Q8N4L4 309 aa15.57■□□□□ 0.08
RPUSD1-204ENST00000563560 CPA6Q8N4T0 437 aa15.57■□□□□ 0.08
RPUSD1-204ENST00000563560 UBA3Q8TBC4 463 aa15.57■□□□□ 0.08
RPUSD1-204ENST00000563560 SHC3Q92529 594 aa15.57■□□□□ 0.08
RPUSD1-204ENST00000563560 NDRG1Q92597 394 aaKnown RBP15.57■□□□□ 0.08
RPUSD1-204ENST00000563560 SPATA6Q9NWH7 488 aaPredicted RBP15.57■□□□□ 0.08
RPUSD1-204ENST00000563560 PCDHB4Q9Y5E5 795 aa15.57■□□□□ 0.08
RPUSD1-204ENST00000563560 A0A0A0MRY4 1105 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 PRR23AA6NEV1 266 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 MDM4O15151 490 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 EGFP01133 1207 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 SETSIPP0DME0 302 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 GPD2P43304 727 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 PSEN1P49768 467 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 TKTL1P51854 596 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 SATB1Q01826 763 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 DHCR24Q15392 516 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 MEA1Q16626 185 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 PMF1Q6P1K2 205 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 TSSK4Q6SA08 328 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 C11orf57Q6ZUT1 292 aaPredicted RBP15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 ALYREFQ86V81 257 aaKnown RBP15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 ETFBKMTQ8IXQ9 262 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 ENOX1Q8TC92 643 aaKnown RBP15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 UBE2TQ9NPD8 197 aaPredicted RBP15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 ACP6Q9NPH0 428 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 TMEM63CQ9P1W3 806 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 APEX2Q9UBZ4 518 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 CYTH4Q9UIA0 394 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 NUDT5Q9UKK9 219 aa15.56■□□□□ 0.08
RPUSD1-204ENST00000563560 CHURC1-FNTBB4DL54 471 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 K7EQS6 105 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 NFATC1O95644 943 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 KLKB1P03952 638 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 CD19P15391 556 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 ATP5C1P36542 298 aaKnown RBP15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 LRRC32Q14392 662 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 GBP6Q6ZN66 633 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 SFTPA1Q8IWL2 248 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 SECISBP2LQ93073 1101 aaKnown RBP15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 OTUB2Q96DC9 234 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 P2RY13Q9BPV8 354 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 TUBGCP2Q9BSJ2 902 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 NAA15Q9BXJ9 866 aaKnown RBP15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 ULBP1Q9BZM6 244 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 DNAI2Q9GZS0 605 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 NDST4Q9H3R1 872 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 R4GN57 208 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 SPAG17Q6Q759 2223 aa15.55■□□□□ 0.08
RPUSD1-204ENST00000563560 YJEFN3A6XGL0 299 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 E7ENQ6 273 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 SLC9A3R1O14745 358 aaPredicted RBP15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 HOXC11O43248 304 aaPredicted RBP15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 LAMTOR5O43504 91 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 STC2O76061 302 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 ZBED1O96006 694 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 FYNP06241 537 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 DRD1P21728 446 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 HOXA6P31267 233 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 DAOAP59103 153 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 YWHAGP61981 247 aaKnown RBP eCLIP15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 DMWDQ09019 674 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 ADIGQ0VDE8 80 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 NCAPHQ15003 741 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 STILQ15468 1287 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 EXOC3L4Q17RC7 722 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 VWA3BQ502W6 1294 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 HSP90AA4PQ58FG1 418 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 TCP11X2Q5H9J9 407 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 ENOSF1Q7L5Y1 443 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 APTXQ7Z2E3 356 aaKnown RBP15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 SUMF1Q8NBK3 374 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 CD101Q93033 1021 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 MARK1Q9P0L2 795 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 TBC1D14Q9P2M4 693 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 DACH1Q9UI36 760 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 DNMT3LQ9UJW3 386 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 NAGPAQ9UK23 515 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 HCN2Q9UL51 889 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 NFE2L3Q9Y4A8 694 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 PLXND1Q9Y4D7 1925 aa15.54■□□□□ 0.08
RPUSD1-204ENST00000563560 SPTBN4Q9H254 2564 aa15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 LAMA1P25391 3075 aa15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 KCNJ18B7U540 433 aa15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 GFRA2O00451 464 aa15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 EEF1GP26641 437 aaKnown RBP15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 EIF2DP41214 584 aaKnown RBP15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 MTIF2P46199 727 aaKnown RBP15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 SLC6A11P48066 632 aa15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 CCR3P51677 355 aa15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 CSTF1Q05048 431 aaKnown RBP15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 KCNJ12Q14500 433 aa15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 LY6G5CQ5SRR4 150 aa15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 TMEM25Q86YD3 366 aa15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 FAM217AQ8IXS0 508 aa15.53■□□□□ 0.08
RPUSD1-204ENST00000563560 WDTC1Q8N5D0 677 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms