RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 TOGARAM2Q6ZUX3 1019 aa17.15■□□□□ 0.34
USB1-206ENST00000562534 RSRC2Q7L4I2 434 aaKnown RBP17.15■□□□□ 0.34
USB1-206ENST00000562534 BHLHA9Q7RTU4 235 aa17.15■□□□□ 0.34
USB1-206ENST00000562534 ZNF571Q7Z3V5 609 aaPredicted RBP17.15■□□□□ 0.34
USB1-206ENST00000562534 DDX42Q86XP3 938 aaKnown RBP eCLIP17.15■□□□□ 0.34
USB1-206ENST00000562534 MFSD6LQ8IWD5 586 aa17.15■□□□□ 0.34
USB1-206ENST00000562534 USP13Q92995 863 aaPredicted RBP17.15■□□□□ 0.34
USB1-206ENST00000562534 SLC22A12Q96S37 553 aa17.15■□□□□ 0.34
USB1-206ENST00000562534 ASNSD1Q9NWL6 643 aa17.15■□□□□ 0.34
USB1-206ENST00000562534 THG1LQ9NWX6 298 aaKnown RBP17.15■□□□□ 0.34
USB1-206ENST00000562534 ARHGAP26Q9UNA1 814 aa17.15■□□□□ 0.34
USB1-206ENST00000562534 GOLGA6L3A6NEY3 463 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 HEPACAM2A8MVW5 462 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 MFAP3LO75121 409 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 ERBB2P04626 1255 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 TCF3P15923 654 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 PSMC3P17980 439 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 FCARP24071 287 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 CDC25BP30305 580 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 SCNN1AP37088 669 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 ADKP55263 362 aaKnown RBP17.14■□□□□ 0.33
USB1-206ENST00000562534 COG7P83436 770 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 CENPCQ03188 943 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 TDRD12Q587J7 1177 aaKnown RBP17.14■□□□□ 0.33
USB1-206ENST00000562534 PHF13Q86YI8 300 aaPredicted RBP17.14■□□□□ 0.33
USB1-206ENST00000562534 KIAA1958Q8N8K9 716 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 SLC30A5Q8TAD4 765 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 BPIFB1Q8TDL5 484 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 CLEC4CQ8WTT0 213 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 DEPDC1BQ8WUY9 529 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 RSAD2Q8WXG1 361 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 FAM149B1Q96BN6 582 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 VCPIP1Q96JH7 1222 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 NECAB3Q96P71 396 aaPredicted RBP17.14■□□□□ 0.33
USB1-206ENST00000562534 RPP25Q9BUL9 199 aaKnown RBP17.14■□□□□ 0.33
USB1-206ENST00000562534 TRMT61BQ9BVS5 477 aaKnown RBP17.14■□□□□ 0.33
USB1-206ENST00000562534 POPDC2Q9HBU9 364 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 CD320Q9NPF0 282 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 ABHD10Q9NUJ1 306 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 ADAM22Q9P0K1 906 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 WDR35Q9P2L0 1181 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 STRIP2Q9ULQ0 834 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 SORCS3Q9UPU3 1222 aa17.14■□□□□ 0.33
USB1-206ENST00000562534 SPTBN5Q9NRC6 3674 aaKnown RBP17.14■□□□□ 0.33
USB1-206ENST00000562534 PATJQ8NI35 1801 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 CAPN9O14815 690 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 TBX18O95935 607 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 CALB1P05937 261 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 ASGR2P07307 311 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 GOLGA8FQ08AF8 430 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 GOLGA8DPQ0D2H9 430 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.13■□□□□ 0.33
USB1-206ENST00000562534 YAF2Q8IY57 180 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 KXD1Q9BQD3 176 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.13■□□□□ 0.33
USB1-206ENST00000562534 PLA2G2FQ9BZM2 168 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 SMG9Q9H0W8 520 aaKnown RBP17.13■□□□□ 0.33
USB1-206ENST00000562534 IMPACTQ9P2X3 320 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 TJP2Q9UDY2 1190 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 ADAMTS1Q9UHI8 967 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 CPQQ9Y646 472 aa17.13■□□□□ 0.33
USB1-206ENST00000562534 DOCK8Q8NF50 2099 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 DDX3XO00571 662 aaKnown RBP eCLIP17.12■□□□□ 0.332e-15■■■■■ 27.4
USB1-206ENST00000562534 HSF2BPO75031 334 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 RTN2O75298 545 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 PRAMEF12O95522 483 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 NCAM1P13591 858 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 KPNA1P52294 538 aaPredicted RBP17.12■□□□□ 0.33
USB1-206ENST00000562534 CDK17Q00537 523 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
USB1-206ENST00000562534 CC2D1AQ6P1N0 951 aaPredicted RBP17.12■□□□□ 0.33
USB1-206ENST00000562534 WDR59Q6PJI9 974 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 OLFML1Q6UWY5 402 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 VITQ6UXI7 678 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 HFE2Q6ZVN8 426 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 FAM183BPQ6ZVS7 135 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 SLC26A9Q7LBE3 791 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 XYLT1Q86Y38 959 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 UBALD2Q8IYN6 164 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 ST13P5Q8NFI4 369 aaPredicted RBP17.12■□□□□ 0.33
USB1-206ENST00000562534 SH3RF2Q8TEC5 729 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 EDEM1Q92611 657 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 KLF16Q9BXK1 252 aaPredicted RBP17.12■□□□□ 0.33
USB1-206ENST00000562534 GRPEL1Q9HAV7 217 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 MARCH2Q9P0N8 246 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 ARHGAP20Q9P2F6 1191 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 NUDT5Q9UKK9 219 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 CCL26Q9Y258 94 aa17.12■□□□□ 0.33
USB1-206ENST00000562534 DENND4CQ5VZ89 1909 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 SSU72P8A0A1W2PR75 194 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 LEFTY2O00292 366 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 ZNF263O14978 683 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 CHADO15335 359 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 FTLP02792 175 aaPredicted RBP17.11■□□□□ 0.33
USB1-206ENST00000562534 FYNP06241 537 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 FCHO2Q0JRZ9 810 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 EFEMP1Q12805 493 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 ARHGAP29Q52LW3 1261 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 MMS22LQ6ZRQ5 1243 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 ARCQ7LC44 396 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms