RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 TAB2Q9NYJ8 693 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 APEX2Q9UBZ4 518 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 SH3BP1Q9Y3L3 701 aa20.33■□□□□ 0.85
TMEM249-202ENST00000562477 PES1O00541 588 aaKnown RBP20.32■□□□□ 0.84
TMEM249-202ENST00000562477 ZBED1O96006 694 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 LCP1P13796 627 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 HOXC13P31276 330 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 LRRC32Q14392 662 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 DHCR24Q15392 516 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 STX1AQ16623 288 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 TCP11X2Q5H9J9 407 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 DPY19L2P1Q6NXN4 242 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 DENND1BQ6P3S1 775 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 PKN3Q6P5Z2 889 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 RHBDF2Q6PJF5 856 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 SASS6Q6UVJ0 657 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 ALYREFQ86V81 257 aaKnown RBP20.32■□□□□ 0.84
TMEM249-202ENST00000562477 ADGRG2Q8IZP9 1017 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 SLC35F5Q8WV83 523 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 EZH1Q92800 747 aaPredicted RBP20.32■□□□□ 0.84
TMEM249-202ENST00000562477 P2RY13Q9BPV8 354 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 PRMT8Q9NR22 394 aaPredicted RBP20.32■□□□□ 0.84
TMEM249-202ENST00000562477 R4GN57 208 aa20.32■□□□□ 0.84
TMEM249-202ENST00000562477 PTPRZ1P23471 2315 aaPredicted RBP20.31■□□□□ 0.84
TMEM249-202ENST00000562477 SLC9A3R1O14745 358 aaPredicted RBP20.31■□□□□ 0.84
TMEM249-202ENST00000562477 PNMA6AP0CW24 399 aaPredicted RBP20.31■□□□□ 0.84
TMEM249-202ENST00000562477 RALAP11233 206 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 USP8P40818 1118 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 OPRD1P41143 372 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 NBL1P41271 181 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 MRE11P49959 708 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 YWHAGP61981 247 aaKnown RBP eCLIP20.31■□□□□ 0.84
TMEM249-202ENST00000562477 SATB1Q01826 763 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 GRSF1Q12849 480 aaKnown RBP eCLIP20.31■□□□□ 0.84
TMEM249-202ENST00000562477 NR1H3Q13133 447 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 DGKKQ5KSL6 1271 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 CDKAL1Q5VV42 579 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 PM20D1Q6GTS8 502 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 ENOSF1Q7L5Y1 443 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 MIB1Q86YT6 1006 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 KIAA1958Q8N8K9 716 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 ANO10Q9NW15 660 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 CLIC5Q9NZA1 410 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 RASAL2Q9UJF2 1139 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 DNMT3LQ9UJW3 386 aa20.31■□□□□ 0.84
TMEM249-202ENST00000562477 YJEFN3A6XGL0 299 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 E7ENQ6 273 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 LETM1O95202 739 aaPredicted RBP20.3■□□□□ 0.84
TMEM249-202ENST00000562477 SLC6A11P48066 632 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 PSEN1P49768 467 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 MESP2Q0VG99 397 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 KCNMA1Q12791 1236 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 EFEMP1Q12805 493 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 STILQ15468 1287 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 LY6G5CQ5SRR4 150 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 KLHDC10Q6PID8 442 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 C12orf40Q86WS4 652 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 CLEC4CQ8WTT0 213 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 KCTD13Q8WZ19 329 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 SHC3Q92529 594 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 CD101Q93033 1021 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 POLR3BQ9NW08 1133 aaPredicted RBP20.3■□□□□ 0.84
TMEM249-202ENST00000562477 FANCLQ9NW38 375 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 TBC1D14Q9P2M4 693 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 DNAJC12Q9UKB3 198 aa20.3■□□□□ 0.84
TMEM249-202ENST00000562477 ANTXRLA6NF34 631 aa20.29■□□□□ 0.84
TMEM249-202ENST00000562477 THAP12O43422 761 aa20.29■□□□□ 0.84
TMEM249-202ENST00000562477 HMBSP08397 361 aa20.29■□□□□ 0.84
TMEM249-202ENST00000562477 EEF1GP26641 437 aaKnown RBP20.29■□□□□ 0.84
TMEM249-202ENST00000562477 AMPD2Q01433 879 aa20.29■□□□□ 0.84
TMEM249-202ENST00000562477 TYRO3Q06418 890 aa20.29■□□□□ 0.84
TMEM249-202ENST00000562477 KRT31Q15323 416 aa20.29■□□□□ 0.84
TMEM249-202ENST00000562477 CAVIN1Q6NZI2 390 aaKnown RBP20.29■□□□□ 0.84
TMEM249-202ENST00000562477 SFTPA1Q8IWL2 248 aa20.29■□□□□ 0.84
TMEM249-202ENST00000562477 SIX6OS1Q8N1H7 587 aa20.29■□□□□ 0.84
TMEM249-202ENST00000562477 ARHGAP18Q8N392 663 aa20.29■□□□□ 0.84
TMEM249-202ENST00000562477 EDEM1Q92611 657 aa20.29■□□□□ 0.84
TMEM249-202ENST00000562477 LSM14BQ9BX40 385 aaKnown RBP20.29■□□□□ 0.84
TMEM249-202ENST00000562477 CYTH4Q9UIA0 394 aa20.29■□□□□ 0.84
TMEM249-202ENST00000562477 FBXO4Q9UKT5 387 aa20.29■□□□□ 0.84
TMEM249-202ENST00000562477 USP34Q70CQ2 3546 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 STC2O76061 302 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 ADH5P11766 374 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 TDGF1P13385 188 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 GNA15P30679 374 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 HOXD11P31277 338 aaPredicted RBP20.28■□□□□ 0.84
TMEM249-202ENST00000562477 GPD2P43304 727 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 DAOAP59103 153 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 BSPRYQ5W0U4 402 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 HTR3DQ70Z44 454 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 RSRC2Q7L4I2 434 aaKnown RBP20.28■□□□□ 0.84
TMEM249-202ENST00000562477 TADA2BQ86TJ2 420 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 TMEM25Q86YD3 366 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 SPEM1Q8N4L4 309 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 ZNF276Q8N554 614 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 ZNF606Q8WXB4 792 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 VPS16Q9H269 839 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 MARCH2Q9P0N8 246 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 FHOD1Q9Y613 1164 aa20.28■□□□□ 0.84
TMEM249-202ENST00000562477 FAM186AA6NE01 2351 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms