RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 TTC39CQ8N584 583 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 KIAA1958Q8N8K9 716 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 RPLP0P6Q8NHW5 317 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 ATRIPQ8WXE1 791 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 CNOT6LQ96LI5 555 aaKnown RBP11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 CRACR2AQ9BSW2 395 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 ULBP1Q9BZM6 244 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 EPC1Q9H2F5 836 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 SEMA4AQ9H3S1 761 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 FAM124BQ9H5Z6 455 aaPredicted RBP11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 ZDHHC4Q9NPG8 344 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 ACP6Q9NPH0 428 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 NAGPAQ9UK23 515 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 SH3BP1Q9Y3L3 701 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 PCDHB4Q9Y5E5 795 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 PIK3R2O00459 728 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 SLC9A3R1O14745 358 aaPredicted RBP11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 XPO1O14980 1071 aaKnown RBP11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 GNA14O95837 355 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 KLKB1P03952 638 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 VDRP11473 427 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 ADH5P11766 374 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 HNRNPLP14866 589 aaKnown RBP eCLIP11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 TRIM21P19474 475 aaKnown RBP11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 SLC9A1P19634 815 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 TKTL1P51854 596 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 ZNF132P52740 706 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 BCAT1P54687 386 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 SEC13P55735 322 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 AMPD2Q01433 879 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 NR1H3Q13133 447 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 C10orf120Q5SQS8 335 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 EMC10Q5UCC4 262 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 PM20D1Q6GTS8 502 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 Q6ZNB5 142 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 HTR3DQ70Z44 454 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 ETFBKMTQ8IXQ9 262 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 NAT16Q8N8M0 369 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 RBBP8NLQ8NC74 664 aaPredicted RBP11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 GPT2Q8TD30 523 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 HHIPQ96QV1 700 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 FAM126AQ9BYI3 521 aaPredicted RBP11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 UBXN6Q9BZV1 441 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 NACA2Q9H009 215 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 INTS2Q9H0H0 1204 aaKnown RBP11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 AJAP1Q9UKB5 411 aaPredicted RBP11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 HCN2Q9UL51 889 aa11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 SMG5Q9UPR3 1016 aaKnown RBP11.66□□□□□ -0.54
LPCAT4-202ENST00000562404 YJEFN3A6XGL0 299 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 E7ENQ6 273 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 STC2O76061 302 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 PAEPP09466 180 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 CCDC192P0DO97 292 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 PLA2G4AP47712 749 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 RGS7P49802 495 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 YWHAEP62258 255 aaKnown RBP11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 GCNT1Q02742 428 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 KDSRQ06136 332 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 ADIGQ0VDE8 80 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 BST2Q10589 180 aaKnown RBP11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 EFEMP1Q12805 493 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 C2orf27AQ580R0 203 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 HSP90AA4PQ58FG1 418 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 PMF1Q6P1K2 205 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 KLHDC10Q6PID8 442 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 LCLAT1Q6UWP7 414 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 MIB1Q86YT6 1006 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 CREBRFQ8IUR6 639 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 ZNF276Q8N554 614 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 USP33Q8TEY7 942 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 CLEC4CQ8WTT0 213 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 SLC35F5Q8WV83 523 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 SECISBP2LQ93073 1101 aaKnown RBP11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 NUP62CLQ9H1M0 184 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 SPHK2Q9NRA0 654 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 CLIC5Q9NZA1 410 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 TBC1D14Q9P2M4 693 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 DNMT3LQ9UJW3 386 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 CNTN6Q9UQ52 1028 aa11.65□□□□□ -0.54
LPCAT4-202ENST00000562404 CEP250Q9BV73 2442 aa11.65□□□□□ -0.55
LPCAT4-202ENST00000562404 BECN2A8MW95 431 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 HOXC11O43248 304 aaPredicted RBP11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 TULP3O75386 442 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 KAT7O95251 611 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 ZBED1O96006 694 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 ADH1CP00326 375 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 HMBSP08397 361 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 LCP1P13796 627 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 TGM1P22735 817 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 HOXA6P31267 233 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 KIR2DL1P43626 348 aaPredicted RBP11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 PSEN1P49768 467 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 NRLP54845 237 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 YWHAGP61981 247 aaKnown RBP eCLIP11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 GAD2Q05329 585 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 DMC1Q14565 340 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 PPP2R5DQ14738 602 aa11.64□□□□□ -0.55
LPCAT4-202ENST00000562404 CNGA2Q16280 664 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms