RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 FAF2Q96CS3 445 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 ZNF689Q96CS4 500 aaPredicted RBP9.94□□□□□ -0.82
CDH13-205ENST00000562307 C8orf48Q96LL4 319 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 RNF157Q96PX1 679 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 SNRNP25Q9BV90 132 aaKnown RBP9.94□□□□□ -0.82
CDH13-205ENST00000562307 RHOBTB2Q9BYZ6 727 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 CWH43Q9H720 699 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 PRDM16Q9HAZ2 1276 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 PCDH18Q9HCL0 1135 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 ZDHHC18Q9NUE0 388 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.94□□□□□ -0.82
CDH13-205ENST00000562307 GRHL1Q9NZI5 618 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 FAM153AQ9UHL3 310 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 STAP1Q9ULZ2 295 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 TRIM43BA6NCK2 446 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 APOC4-APOC2K7ER74 178 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 CST8O60676 142 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 GAS8O95995 478 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 APOC2P02655 101 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 ITGAVP06756 1048 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 USP17L7P0C7H9 530 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 CYP2F1P24903 491 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 ITGB8P26012 769 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 IVDP26440 423 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 RDXP35241 583 aaKnown RBP9.93□□□□□ -0.82
CDH13-205ENST00000562307 HSPA9P38646 679 aaKnown RBP9.93□□□□□ -0.82
CDH13-205ENST00000562307 RPL21P46778 160 aaKnown RBP9.93□□□□□ -0.82
CDH13-205ENST00000562307 SULT1E1P49888 294 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 RABGGTBP53611 331 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 AIF1P55008 147 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 VCPP55072 806 aaKnown RBP9.93□□□□□ -0.82
CDH13-205ENST00000562307 CDH6P55285 790 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 BCAR1P56945 870 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 KRT17Q04695 432 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 GPR17Q13304 367 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 SNX1Q13596 522 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 BYSLQ13895 437 aaKnown RBP9.93□□□□□ -0.82
CDH13-205ENST00000562307 CA9Q16790 459 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 CTXN3Q4LDR2 81 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 SLC39A12Q504Y0 691 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 DCAF6Q58WW2 860 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 ZNF280DQ6N043 979 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 MFSD5Q6N075 450 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 SCYL2Q6P3W7 929 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 ZDHHC24Q6UX98 284 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 TET1Q8NFU7 2136 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 ART4Q93070 314 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 TRIM43Q96BQ3 446 aaPredicted RBP9.93□□□□□ -0.82
CDH13-205ENST00000562307 ZNF670Q9BS34 389 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 TRIM62Q9BVG3 475 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 NEUROG2Q9H2A3 272 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 DPH5Q9H2P9 285 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 RC3H2Q9HBD1 1191 aaKnown RBP9.93□□□□□ -0.82
CDH13-205ENST00000562307 TMEM51Q9NW97 253 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 MTMR10Q9NXD2 777 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 IL37Q9NZH6 218 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 CALCOCO1Q9P1Z2 691 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 WHRNQ9P202 907 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 RCOR3Q9P2K3 495 aaPredicted RBP9.93□□□□□ -0.82
CDH13-205ENST00000562307 HCSTQ9UBK5 93 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 DNPEPQ9ULA0 475 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 FZD10Q9ULW2 581 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 HPCAL4Q9UM19 191 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 SNX24Q9Y343 169 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 PCDHB5Q9Y5E4 795 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 SCN5AQ14524 2016 aa9.93□□□□□ -0.82
CDH13-205ENST00000562307 CARNS1A5YM72 827 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 M0QYT0 321 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 TP73O15350 636 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 F9P00740 461 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 OR4Q2P0C623 313 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 ITIH2P19823 946 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 KLRC2P26717 231 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 GRIK1P39086 918 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 TNNT3P45378 269 aaPredicted RBP9.92□□□□□ -0.82
CDH13-205ENST00000562307 ALDH7A1P49419 539 aaKnown RBP9.92□□□□□ -0.82
CDH13-205ENST00000562307 ATXN1P54253 815 aaKnown RBP9.92□□□□□ -0.82
CDH13-205ENST00000562307 PITX1P78337 314 aaPredicted RBP9.92□□□□□ -0.82
CDH13-205ENST00000562307 SCAPQ12770 1279 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 MMRN1Q13201 1228 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 EIF4EBP2Q13542 120 aaPredicted RBP9.92□□□□□ -0.82
CDH13-205ENST00000562307 HLTFQ14527 1009 aaKnown RBP eCLIP9.92□□□□□ -0.82
CDH13-205ENST00000562307 KRT81Q14533 505 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 PPP1R7Q15435 360 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 ANKRD20A8PQ5CZ79 823 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 ZC3H12AQ5D1E8 599 aaKnown RBP9.92□□□□□ -0.82
CDH13-205ENST00000562307 SPDYCQ5MJ68 293 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 BSPRYQ5W0U4 402 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 ALS2CLQ60I27 953 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 SLC9A4Q6AI14 798 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 ANKS3Q6ZW76 656 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 TAS1R1Q7RTX1 841 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 UBE2Q1Q7Z7E8 422 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 RFX6Q8HWS3 928 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 IQCKQ8N0W5 287 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 ALLCQ8N6M5 410 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 PQLC3Q8N755 202 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 CCDC89Q8N998 374 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 PCDH19Q8TAB3 1148 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 ACTL9Q8TC94 416 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms