RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 COMMD8Q9NX08 183 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 MYO1AQ9UBC5 1043 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 DNAI1Q9UI46 699 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 PRDM4Q9UKN5 801 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 MAGED2Q9UNF1 606 aaPredicted RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 COQ4Q9Y3A0 265 aa7.29□□□□□ -1.24
SPG11-224ENST00000561268 ASCC3Q8N3C0 2202 aaKnown RBP7.29□□□□□ -1.24
SPG11-224ENST00000561268 ITIH6Q6UXX5 1313 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 TMEM131Q92545 1883 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 A8MXQ7 604 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 BHMG1C9JSJ3 638 aaPredicted RBP7.28□□□□□ -1.24
SPG11-224ENST00000561268 CLDN5O00501 218 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 SLC16A3O15427 465 aaKnown RBP7.28□□□□□ -1.24
SPG11-224ENST00000561268 GREM1O60565 184 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 LRP3O75074 770 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 SMC2O95347 1197 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 CYP17A1P05093 508 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 PDGFRBP09619 1106 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 TRIM49P0CI25 452 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 TRIM49CP0CI26 452 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 P4HA1P13674 534 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 DRD1P21728 446 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 ANXA13P27216 316 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 CNR2P34972 360 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 GRIK1P39086 918 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 OPRD1P41143 372 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 PIK3CAP42336 1068 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 CXCL12P48061 93 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 NRLP54845 237 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 CDH8P55286 799 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 CYP27A1Q02318 531 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 CSTF1Q05048 431 aaKnown RBP7.28□□□□□ -1.24
SPG11-224ENST00000561268 TAF10Q12962 218 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 BIRC3Q13489 604 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 PPP2R5DQ14738 602 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 SGSM1Q2NKQ1 1148 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 FBXO43Q4G163 708 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 E4F1Q66K89 784 aaPredicted RBP7.28□□□□□ -1.24
SPG11-224ENST00000561268 NAIF1Q69YI7 327 aaPredicted RBP7.28□□□□□ -1.24
SPG11-224ENST00000561268 SPOPLQ6IQ16 392 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 TSSK4Q6SA08 328 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 SCARA5Q6ZMJ2 495 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 CLEC20AQ6ZU45 233 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 WDR5BQ86VZ2 330 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 DDX42Q86XP3 938 aaKnown RBP eCLIP7.28□□□□□ -1.24
SPG11-224ENST00000561268 FAM186BQ8IYM0 893 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 KRT222Q8N1A0 295 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 NUP93Q8N1F7 819 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 PHTF2Q8N3S3 785 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 CPA6Q8N4T0 437 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 ZNF276Q8N554 614 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 UBR7Q8N806 425 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 TAS1R2Q8TE23 839 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 CCDC47Q96A33 483 aaKnown RBP7.28□□□□□ -1.24
SPG11-224ENST00000561268 IQCDQ96DY2 449 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 PPP1R13BQ96KQ4 1090 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 SLITRK1Q96PX8 696 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 PANX2Q96RD6 677 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 HNRNPABQ99729 332 aaKnown RBP7.28□□□□□ -1.24
SPG11-224ENST00000561268 SMOQ99835 787 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 SLC4A5Q9BY07 1137 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 RNF38Q9H0F5 515 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 HSD3B7Q9H2F3 369 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 CYLDQ9NQC7 956 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 DLL3Q9NYJ7 618 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 TRPM5Q9NZQ8 1165 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 NXF1Q9UBU9 619 aaKnown RBP7.28□□□□□ -1.24
SPG11-224ENST00000561268 FRMD4BQ9Y2L6 1034 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 WNT6Q9Y6F9 365 aa7.28□□□□□ -1.24
SPG11-224ENST00000561268 LEFTY2O00292 366 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 PMM2O15305 246 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 COCHO43405 550 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 PHACTR2O75167 634 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 BEST1O76090 585 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 NFATC1O95644 943 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 EGFP01133 1207 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 CCDC130P13994 396 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 RPL13P26373 211 aaKnown RBP7.27□□□□□ -1.25
SPG11-224ENST00000561268 YWHAQP27348 245 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 PSMC2P35998 433 aaKnown RBP7.27□□□□□ -1.25
SPG11-224ENST00000561268 PPP1R2P41236 205 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 PRCPP42785 496 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 IFNAR2P48551 515 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 MXI1P50539 228 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 NDST1P52848 882 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 PMS1P54277 932 aaKnown RBP7.27□□□□□ -1.25
SPG11-224ENST00000561268 UBASH3AP57075 661 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 LRRC63Q05C16 580 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 DMWDQ09019 674 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 PNOCQ13519 176 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 TRIM14Q14142 442 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 MORC3Q14149 939 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 ZNF658Q5TYW1 1059 aaPredicted RBP7.27□□□□□ -1.25
SPG11-224ENST00000561268 SPECC1LQ69YQ0 1117 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 KRT39Q6A163 491 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 LAIR1Q6GTX8 287 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 KLHDC10Q6PID8 442 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 ZNF662Q6ZS27 426 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 ERMP1Q7Z2K6 904 aa7.27□□□□□ -1.25
SPG11-224ENST00000561268 GPRIN1Q7Z2K8 1008 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms