RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 USP4Q13107 963 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 ZNF77Q15935 545 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 PTPN20Q4JDL3 420 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 TAF3Q5VWG9 929 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 E4F1Q66K89 784 aaPredicted RBP10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 MSANTD2Q6P1R3 559 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 ARCQ7LC44 396 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 DDX42Q86XP3 938 aaKnown RBP eCLIP10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 C1orf131Q8NDD1 294 aaKnown RBP10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 BPIFB1Q8TDL5 484 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 KHSRPQ92945 711 aaKnown RBP eCLIP10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 ZFRQ96KR1 1074 aaKnown RBP10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 PCDHB18PQ96TA0 734 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 KXD1Q9BQD3 176 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 TRIM62Q9BVG3 475 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 KLF16Q9BXK1 252 aaPredicted RBP10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 MIS12Q9H081 205 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 CCSER2Q9H7U1 834 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 TRPC7Q9HCX4 862 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 OLA1Q9NTK5 396 aaKnown RBP10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 NAGPAQ9UK23 515 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 CCL26Q9Y258 94 aa10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 MYO18AQ92614 2054 aaKnown RBP10.1□□□□□ -0.79
RABGGTA-221ENST00000561055 E2F8A0AVK6 867 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 TNFRSF10AO00220 468 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 ARNTLO00327 626 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 DPYSL4O14531 572 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 DCXO43602 365 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 ABL1P00519 1130 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 LTFP02788 710 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 ERBB2P04626 1255 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 SRFP11831 508 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 GZMAP12544 262 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 ALADP13716 330 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 MMP8P22894 467 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 CASP14P31944 242 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 YWHAZP63104 245 aaKnown RBP10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 ZXDAP98168 799 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 PLCB2Q00722 1185 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 ARID5AQ03989 594 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 ASIC2Q16515 512 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 CLEC16AQ2KHT3 1053 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 ARHGAP29Q52LW3 1261 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 EFHC1Q5JVL4 640 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 BTBD8Q5XKL5 378 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 HGSNATQ68CP4 663 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 PPP1R2P3Q6NXS1 205 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 HFE2Q6ZVN8 426 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 ERICH1Q86X53 443 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 PHF13Q86YI8 300 aaPredicted RBP10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 PASD1Q8IV76 773 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 MSANTD4Q8NCY6 345 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 OR8K1Q8NGG5 319 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 SLC30A5Q8TAD4 765 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 CLEC4CQ8WTT0 213 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 NDRG1Q92597 394 aaKnown RBP10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 EDAQ92838 391 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 DNASE1L2Q92874 299 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 C18orf8Q96DM3 657 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 VCPIP1Q96JH7 1222 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 DNAJC7Q99615 494 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 FAM83CQ9BQN1 747 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 TRMT61BQ9BVS5 477 aaKnown RBP10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 PDCL3Q9H2J4 239 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 HAUS4Q9H6D7 363 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 ST7Q9NRC1 585 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 WNT16Q9UBV4 365 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 TJP2Q9UDY2 1190 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 MUTYHQ9UIF7 546 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 DNMT3LQ9UJW3 386 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 COL4A3Q01955 1670 aa10.09□□□□□ -0.79
RABGGTA-221ENST00000561055 LEFTY2O00292 366 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 GREM1O60565 184 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 TBX18O95935 607 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 SERPING1P05155 500 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 MBL2P11226 248 aaPredicted RBP10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 TNFAIP3P21580 790 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 ZNF75DP51815 510 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 GPC5P78333 572 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 COG7P83436 770 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 PFKPQ01813 784 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 SLC6A3Q01959 620 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 KLHL30Q0D2K2 578 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 PTP4A2Q12974 167 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 EIF4EBP2Q13542 120 aaPredicted RBP10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 NAA35Q5VZE5 725 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 WDR59Q6PJI9 974 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 OLFML1Q6UWY5 402 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 HTR3DQ70Z44 454 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 SLC26A9Q7LBE3 791 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 ZNF571Q7Z3V5 609 aaPredicted RBP10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 XYLT1Q86Y38 959 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 RIN3Q8TB24 985 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 SH3RF2Q8TEC5 729 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 IPO4Q8TEX9 1081 aaKnown RBP10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 RNF139Q8WU17 664 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 CPLX3Q8WVH0 158 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 CPA5Q8WXQ8 436 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 IRF7Q92985 503 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms