RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 RBAKQ9NYW8 714 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 LIMCH1Q9UPQ0 1083 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 BTBD3Q9Y2F9 522 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 SH3BP1Q9Y3L3 701 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 NME7Q9Y5B8 376 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 COL12A1Q99715 3063 aa13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 WASH3PC4AMC7 463 aa13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 BCAT2O15382 392 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 SLC26A4O43511 780 aa13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 CD2BP2O95400 341 aaKnown RBP13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 WARSP23381 471 aaKnown RBP13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 MDH1BQ5I0G3 518 aa13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 DCAF12L1Q5VU92 463 aa13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 IL27RAQ6UWB1 636 aa13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 ZNF605Q86T29 641 aa13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 METTL3Q86U44 580 aaKnown RBP13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 ZNF843Q8N446 348 aa13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 HVCN1Q96D96 273 aa13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 TRIM9Q9C026 710 aa13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 PDE11AQ9HCR9 933 aa13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 USP36Q9P275 1121 aaKnown RBP13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 RAI2Q9Y5P3 530 aa13.61□□□□□ -0.23
RABGGTA-213ENST00000560127 GOLGA8IPA6NC78 632 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 GOLGA8JA6NMD2 632 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 KCNJ18B7U540 433 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 CACNG3O60359 315 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 YWHAQP27348 245 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 MYO1EQ12965 1108 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 PTPRNQ16849 979 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 RILPL1Q5EBL4 403 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 HECTD3Q5T447 861 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 ARL6IP4Q66PJ3 421 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 HS2ST1Q7LGA3 356 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 SFR1Q86XK3 245 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 NUP93Q8N1F7 819 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 CADM4Q8NFZ8 388 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 C1orf216Q8TAB5 229 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 SCFD1Q8WVM8 642 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 FBXO32Q969P5 355 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 CALML4Q96GE6 196 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 HPDLQ96IR7 371 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 CCSER2Q9H7U1 834 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 CHORDC1Q9UHD1 332 aaPredicted RBP13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 PTPRJQ12913 1337 aa13.6□□□□□ -0.23
RABGGTA-213ENST00000560127 A0A1B0GVT2 93 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 METTL12A8MUP2 240 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 E9PAM4 449 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 NEDD8-MDP1E9PL57 170 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 GFRA2O00451 464 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 TNFSF14O43557 240 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 GREM1O60565 184 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 TMEM191BP0C7N4 346 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 IRF1P10914 325 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 TYRP14679 529 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 UBA7P41226 1012 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 FUT11Q495W5 492 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 SNX30Q5VWJ9 437 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 LARP1BQ659C4 914 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 LSM14AQ8ND56 463 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 PDZD8Q8NEN9 1154 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 OR5B17Q8NGF7 314 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 OVCA2Q8WZ82 227 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 AK8Q96MA6 479 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 MRPL45Q9BRJ2 306 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 BACH2Q9BYV9 841 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 ZNF518BQ9C0D4 1074 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 MKRN2Q9H000 416 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 ITM2CQ9NQX7 267 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 INTS13Q9NVM9 706 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 EIF2B4Q9UI10 523 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 SLCO1B1Q9Y6L6 691 aa13.59□□□□□ -0.23
RABGGTA-213ENST00000560127 COL5A1P20908 1838 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 PLK4O00444 970 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 CLDN5O00501 218 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 TLX3O43711 291 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 EIF5BO60841 1220 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 LDHAP00338 332 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 CISD3P0C7P0 127 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 GARTP22102 1010 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 GNL1P36915 607 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 EIF2S3P41091 472 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 TUBP50607 506 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 TPMTP51580 245 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 KIF19Q2TAC6 998 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 CCDC157Q569K6 752 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 L1TD1Q5T7N2 865 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 DHRS13Q6UX07 377 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 SCAMP5Q8TAC9 235 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 XPO6Q96QU8 1125 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 CBWD1Q9BRT8 395 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 BBS2Q9BXC9 721 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 B3GNT5Q9BYG0 378 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 ELOVL4Q9GZR5 314 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 DPEP3Q9H4B8 488 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 MARK1Q9P0L2 795 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 STON1Q9Y6Q2 735 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 PLXNA2O75051 1894 aa13.58□□□□□ -0.24
RABGGTA-213ENST00000560127 RTN3O95197 1032 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-213ENST00000560127 ZDHHC11BP0C7U3 371 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms