RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 SMPD4Q9NXE4 827 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 ARIH1Q9Y4X5 557 aaPredicted RBP17.66■□□□□ 0.42
RPL28-209ENST00000560055 ZDBF2Q9HCK1 2354 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 COL4A2P08572 1712 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 KRBA1A5PL33 1030 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 PAPSS1O43252 624 aaPredicted RBP17.65■□□□□ 0.42
RPL28-209ENST00000560055 LSM8O95777 96 aaKnown RBP17.65■□□□□ 0.42
RPL28-209ENST00000560055 MMEP08473 750 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 ATP5C1P36542 298 aaKnown RBP17.65■□□□□ 0.42
RPL28-209ENST00000560055 FMO1Q01740 532 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 CDR2Q01850 454 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 BSPRYQ5W0U4 402 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 TADA2BQ86TJ2 420 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 DDX42Q86XP3 938 aaKnown RBP eCLIP17.65■□□□□ 0.42
RPL28-209ENST00000560055 SCUBE3Q8IX30 993 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 SLC20A1Q8WUM9 679 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 ZFYVE19Q96K21 471 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 PPP1R13BQ96KQ4 1090 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 KLF16Q9BXK1 252 aaPredicted RBP17.65■□□□□ 0.42
RPL28-209ENST00000560055 ARHGEF3Q9NR81 526 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 THG1LQ9NWX6 298 aaKnown RBP17.65■□□□□ 0.42
RPL28-209ENST00000560055 TJP2Q9UDY2 1190 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 DNMT3LQ9UJW3 386 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 NUDT5Q9UKK9 219 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 CEP83Q9Y592 693 aa17.65■□□□□ 0.42
RPL28-209ENST00000560055 A0A1W2PQJ5 194 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 MDM4O15151 490 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 PTPN20Q4JDL3 420 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 C10orf120Q5SQS8 335 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 IRF2BP2Q7Z5L9 587 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 BMP8AQ7Z5Y6 402 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 TMEM35BQ8NCS4 154 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 OSCP1Q8WVF1 389 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 PBXIP1Q96AQ6 731 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 NOX5Q96PH1 765 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 NUP58Q9BVL2 599 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 NACA2Q9H009 215 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 MIS12Q9H081 205 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 FBXL21Q9UKT6 434 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 ITIH6Q6UXX5 1313 aa17.64■□□□□ 0.41
RPL28-209ENST00000560055 SHISA7A6NL88 538 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 LRRC53A6NM62 1247 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 SART1O43290 800 aaKnown RBP17.63■□□□□ 0.41
RPL28-209ENST00000560055 GREM1O60565 184 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 ERBB2P04626 1255 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 CYP1A1P04798 512 aaPredicted RBP17.63■□□□□ 0.41
RPL28-209ENST00000560055 FERP16591 822 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 NOMO3P69849 1222 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 TNK2Q07912 1038 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 SLC44A4Q53GD3 710 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 BTBD8Q5XKL5 378 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 E4F1Q66K89 784 aaPredicted RBP17.63■□□□□ 0.41
RPL28-209ENST00000560055 BEND5Q7L4P6 421 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 GAS2L3Q86XJ1 694 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 FMNL3Q8IVF7 1028 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 SIX5Q8N196 739 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 OLIG1Q8TAK6 271 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 PIWIL1Q96J94 861 aaKnown RBP17.63■□□□□ 0.41
RPL28-209ENST00000560055 SYT11Q9BT88 431 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 HPS4Q9NQG7 708 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 HEBP1Q9NRV9 189 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 GKN1Q9NS71 199 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 ABCC13Q9NSE7 274 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 CFAP97Q9P2B7 532 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 CA14Q9ULX7 337 aa17.63■□□□□ 0.41
RPL28-209ENST00000560055 E2F8A0AVK6 867 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 CBFA2T2O43439 604 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 PDGFBP01127 241 aaPredicted RBP17.62■□□□□ 0.41
RPL28-209ENST00000560055 LTFP02788 710 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 FYNP06241 537 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 TPM3P06753 285 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 GABRB2P47870 512 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 MLLT6P55198 1093 aaPredicted RBP17.62■□□□□ 0.41
RPL28-209ENST00000560055 STARD6P59095 220 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 ARID5AQ03989 594 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 PDGFRLQ15198 375 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 MLF2Q15773 248 aaPredicted RBP17.62■□□□□ 0.41
RPL28-209ENST00000560055 EML3Q32P44 896 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 TRIM68Q6AZZ1 485 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 CC2D1AQ6P1N0 951 aaPredicted RBP17.62■□□□□ 0.41
RPL28-209ENST00000560055 MSANTD2Q6P1R3 559 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 SARM1Q6SZW1 724 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 EDEM1Q92611 657 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 WBP2Q969T9 261 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 IQCDQ96DY2 449 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 PCDHB18PQ96TA0 734 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 DDX23Q9BUQ8 820 aaKnown RBP17.62■□□□□ 0.41
RPL28-209ENST00000560055 RBSNQ9H1K0 784 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 PDCL3Q9H2J4 239 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 OLA1Q9NTK5 396 aaKnown RBP17.62■□□□□ 0.41
RPL28-209ENST00000560055 DUS2Q9NX74 493 aaKnown RBP17.62■□□□□ 0.41
RPL28-209ENST00000560055 GTSE1Q9NYZ3 720 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 AIPL1Q9NZN9 384 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 WNT6Q9Y6F9 365 aa17.62■□□□□ 0.41
RPL28-209ENST00000560055 OTOL1A6NHN0 477 aaPredicted RBP17.61■□□□□ 0.41
RPL28-209ENST00000560055 GYPCP04921 128 aa17.61■□□□□ 0.41
RPL28-209ENST00000560055 CCDC172P0C7W6 258 aa17.61■□□□□ 0.41
RPL28-209ENST00000560055 ARSAP15289 507 aa17.61■□□□□ 0.41
RPL28-209ENST00000560055 PRKCQQ04759 706 aa17.61■□□□□ 0.41
RPL28-209ENST00000560055 EFEMP1Q12805 493 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms