RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 CYLDQ9NQC7 956 aa18.69■□□□□ 0.58
HDDC3-205ENST00000559898 USP3Q9Y6I4 520 aa18.69■□□□□ 0.58
HDDC3-205ENST00000559898 SLC9A3R1O14745 358 aaPredicted RBP18.68■□□□□ 0.58
HDDC3-205ENST00000559898 ADAM23O75077 832 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 TULP3O75386 442 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 KLF8O95600 359 aaPredicted RBP18.68■□□□□ 0.58
HDDC3-205ENST00000559898 CCDC192P0DO97 292 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 KIR2DL1P43626 348 aaPredicted RBP18.68■□□□□ 0.58
HDDC3-205ENST00000559898 STX17P56962 302 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 ANO4Q32M45 955 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 TTI2Q6NXR4 508 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 TPGS1Q6ZTW0 290 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 BHLHA9Q7RTU4 235 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 PIGZQ86VD9 579 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 MIB1Q86YT6 1006 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 IL17RCQ8NAC3 791 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 SECISBP2LQ93073 1101 aaKnown RBP18.68■□□□□ 0.58
HDDC3-205ENST00000559898 ZSWIM1Q9BR11 485 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 NACA2Q9H009 215 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 DUSP15Q9H1R2 295 aaPredicted RBP18.68■□□□□ 0.58
HDDC3-205ENST00000559898 ARHGEF4Q9NR80 690 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 SPHK2Q9NRA0 654 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 TBC1D14Q9P2M4 693 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 NAGPAQ9UK23 515 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 CTNND2Q9UQB3 1225 aa18.68■□□□□ 0.58
HDDC3-205ENST00000559898 DCDC2BA2VCK2 349 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 RNF225M0QZC1 329 aaPredicted RBP18.67■□□□□ 0.58
HDDC3-205ENST00000559898 GABBR2O75899 941 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 ADH1CP00326 375 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 KLKB1P03952 638 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 HMBSP08397 361 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 BCKDHBP21953 392 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 ATP5C1P36542 298 aaKnown RBP18.67■□□□□ 0.58
HDDC3-205ENST00000559898 DGKEP52429 567 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 CUL2Q13617 745 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 MORC3Q14149 939 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 GOLGA7BQ2TAP0 167 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 C10orf120Q5SQS8 335 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 ARHGAP17Q68EM7 881 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 PRR23CQ6ZRP0 262 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 TOGARAM2Q6ZUX3 1019 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 HTR3DQ70Z44 454 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 DGLUCYQ7Z3D6 616 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 CAMKK1Q8N5S9 505 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 KIAA1958Q8N8K9 716 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 CCDC150Q8NCX0 1101 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 MDGA1Q8NFP4 955 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 UBA3Q8TBC4 463 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 NELFBQ8WX92 580 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 TFAP2BQ92481 460 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 BHMTQ93088 406 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 ARMCX3Q9UH62 379 aaPredicted RBP18.67■□□□□ 0.58
HDDC3-205ENST00000559898 MMP17Q9ULZ9 603 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 CACNA1AO00555 2505 aa18.67■□□□□ 0.58
HDDC3-205ENST00000559898 THADAQ6YHU6 1953 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 A0A0A0MRY4 1105 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 CCDC163A0A0D9SF12 145 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 HOXC11O43248 304 aaPredicted RBP18.66■□□□□ 0.58
HDDC3-205ENST00000559898 STC2O76061 302 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 APBB3O95704 486 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 APODP05090 189 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 WASP42768 502 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 FMO5P49326 533 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 GAD2Q05329 585 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 LRRC63Q05C16 580 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 PDE4CQ08493 712 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 PUM1Q14671 1186 aaKnown RBP eCLIP18.66■□□□□ 0.58
HDDC3-205ENST00000559898 PLK5Q496M5 336 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 RAB41Q5JT25 222 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 TCEAL6Q6IPX3 200 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 ANO7Q6IWH7 933 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 Q6ZNB5 142 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 CCDC186Q7Z3E2 898 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 TSTD1Q8NFU3 115 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 LMO3Q8TAP4 145 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 RLN3Q8WXF3 142 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 TCEAL3Q969E4 200 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 ACDQ96AP0 544 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 CCDC34Q96HJ3 373 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 ACOX2Q99424 681 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 PNPLA8Q9NP80 782 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 PLK2Q9NYY3 685 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 TSPAN16Q9UKR8 245 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 LAMA1P25391 3075 aa18.66■□□□□ 0.58
HDDC3-205ENST00000559898 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.65■□□□□ 0.58
HDDC3-205ENST00000559898 NEDD8-MDP1E9PL57 170 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 STX10O60499 249 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 EPN2O95208 641 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 EFEMP1Q12805 493 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 CRY1Q16526 586 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 CSRP2Q16527 193 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 CACNA2D4Q7Z3S7 1137 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 RASSF3Q86WH2 238 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 ARHGEF19Q8IW93 802 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 DHTKD1Q96HY7 919 aaPredicted RBP18.65■□□□□ 0.58
HDDC3-205ENST00000559898 MED15Q96RN5 788 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 ULBP1Q9BZM6 244 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 EBF1Q9UH73 591 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 RASAL2Q9UJF2 1139 aa18.65■□□□□ 0.58
HDDC3-205ENST00000559898 NUP205Q92621 2012 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms