RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 CA3P07451 260 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 GALTP07902 379 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 PDGFRAP16234 1089 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 NR1D1P20393 614 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 WARSP23381 471 aaKnown RBP18.58■□□□□ 0.56
SNX1-208ENST00000559844 KLRC2P26717 231 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 RGS7P49802 495 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 BCAT1P54687 386 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 VCPP55072 806 aaKnown RBP18.58■□□□□ 0.56
SNX1-208ENST00000559844 SLC6A3Q01959 620 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 ADCY2Q08462 1091 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 BST2Q10589 180 aaKnown RBP18.58■□□□□ 0.56
SNX1-208ENST00000559844 KRT71Q3SY84 523 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 PMF1Q6P1K2 205 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 SH2D3CQ8N5H7 860 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 ANKRD52Q8NB46 1076 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 KCTD6Q8NC69 237 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 C3orf58Q8NDZ4 430 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 CMASQ8NFW8 434 aaPredicted RBP18.58■□□□□ 0.56
SNX1-208ENST00000559844 HASPINQ8TF76 798 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 PBX4Q9BYU1 374 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 FOXP3Q9BZS1 431 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 EPB41L4BQ9H329 900 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 CENPHQ9H3R5 247 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 DNPEPQ9ULA0 475 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 COLQQ9Y215 455 aaPredicted RBP18.58■□□□□ 0.56
SNX1-208ENST00000559844 LINC01553A4QN01 128 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 NT5C1B-RDH14C9J2C7 533 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 SPTLC1O15269 473 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 ITGAVP06756 1048 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 LAG3P18627 525 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 SCNN1AP37088 669 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 TRIP13Q15645 432 aaPredicted RBP18.57■□□□□ 0.56
SNX1-208ENST00000559844 SMTNL2Q2TAL5 461 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 OLFML1Q6UWY5 402 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 BBS12Q6ZW61 710 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 ALLCQ8N6M5 410 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 FAM118BQ9BPY3 351 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 DPEP3Q9H4B8 488 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 YBX2Q9Y2T7 364 aaKnown RBP18.57■□□□□ 0.56
SNX1-208ENST00000559844 ERICH4A6NGS2 130 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 IGFBP6P24592 240 aaPredicted RBP18.57■□□□□ 0.56
SNX1-208ENST00000559844 ACADSBP45954 432 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 PDE4CQ08493 712 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 KCNT1Q5JUK3 1230 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 KCNT2Q6UVM3 1135 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 ADGRF2Q8IZF7 708 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 COLGALT1Q8NBJ5 622 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 ZNF558Q96NG5 402 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 SEMA4AQ9H3S1 761 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 PCSK1NQ9UHG2 260 aa18.57■□□□□ 0.56
SNX1-208ENST00000559844 RIPK2O43353 540 aa18.56■□□□□ 0.56
SNX1-208ENST00000559844 ARHGEF15O94989 841 aa18.56■□□□□ 0.56
SNX1-208ENST00000559844 ITGB1P05556 798 aa18.56■□□□□ 0.56
SNX1-208ENST00000559844 LINC00271P0C7V0 271 aa18.56■□□□□ 0.56
SNX1-208ENST00000559844 LILRA4P59901 499 aa18.56■□□□□ 0.56
SNX1-208ENST00000559844 OASLQ15646 514 aaKnown RBP18.56■□□□□ 0.56
SNX1-208ENST00000559844 RAB30Q15771 203 aa18.56■□□□□ 0.56
SNX1-208ENST00000559844 PRPF38BQ5VTL8 546 aaKnown RBP18.56■□□□□ 0.56
SNX1-208ENST00000559844 IZUMO3Q5VZ72 239 aa18.56■□□□□ 0.56
SNX1-208ENST00000559844 DCLRE1AQ6PJP8 1040 aa18.56■□□□□ 0.56
SNX1-208ENST00000559844 TMEM173Q86WV6 379 aaPredicted RBP18.56■□□□□ 0.56
SNX1-208ENST00000559844 SLC35B2Q8TB61 432 aa18.56■□□□□ 0.56
SNX1-208ENST00000559844 CLP1Q92989 425 aaKnown RBP18.56■□□□□ 0.56
SNX1-208ENST00000559844 TMEM109Q9BVC6 243 aa18.56■□□□□ 0.56
SNX1-208ENST00000559844 AAASQ9NRG9 546 aa18.56■□□□□ 0.56
SNX1-208ENST00000559844 MSRAQ9UJ68 235 aa18.56■□□□□ 0.56
SNX1-208ENST00000559844 PIK3R2O00459 728 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 TP73O15350 636 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 PRPSAP2O60256 369 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 PDGFRBP09619 1106 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 SLC29A2Q14542 456 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 CCDC25Q86WR0 208 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 HSPH1Q92598 858 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 HSFY1Q96LI6 401 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 COLEC11Q9BWP8 271 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 PLXNA4Q9HCM2 1894 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 TULP2O00295 520 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 CST8O60676 142 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 SDC4P31431 198 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 RPL34P49207 117 aaKnown RBP18.55■□□□□ 0.56
SNX1-208ENST00000559844 VPS41P49754 854 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 CCDC14Q49A88 953 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 DNAJC21Q5F1R6 531 aaKnown RBP18.55■□□□□ 0.56
SNX1-208ENST00000559844 ARCQ7LC44 396 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 RFX6Q8HWS3 928 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 TEKT4Q8WW24 435 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 MARCH5Q9NX47 278 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 BCCIPQ9P287 314 aaKnown RBP eCLIP18.55■□□□□ 0.56
SNX1-208ENST00000559844 PCDHB12Q9Y5F1 795 aa18.55■□□□□ 0.56
SNX1-208ENST00000559844 A0A1W2PPC1 479 aa18.54■□□□□ 0.56
SNX1-208ENST00000559844 TMEM189-UBE2V1I3L0A0 370 aa18.54■□□□□ 0.56
SNX1-208ENST00000559844 PAPSS1O43252 624 aaPredicted RBP18.54■□□□□ 0.56
SNX1-208ENST00000559844 TADA2AO75478 443 aa18.54■□□□□ 0.56
SNX1-208ENST00000559844 CCDC130P13994 396 aa18.54■□□□□ 0.56
SNX1-208ENST00000559844 LMO2P25791 158 aa18.54■□□□□ 0.56
SNX1-208ENST00000559844 ADORA2BP29275 332 aa18.54■□□□□ 0.56
SNX1-208ENST00000559844 CTNNB1P35222 781 aa18.54■□□□□ 0.56
SNX1-208ENST00000559844 SLC8A3P57103 927 aa18.54■□□□□ 0.56
SNX1-208ENST00000559844 GNGT1P63211 74 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms