RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 SCAMP3O14828 347 aaKnown RBP18.51■□□□□ 0.55
SMAD3-210ENST00000559092 XPO1O14980 1071 aaKnown RBP18.51■□□□□ 0.55
SMAD3-210ENST00000559092 HOXC11O43248 304 aaPredicted RBP18.51■□□□□ 0.55
SMAD3-210ENST00000559092 HRO43593 1189 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 GREM1O60565 184 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 CD19P15391 556 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 DMWDQ09019 674 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 BST2Q10589 180 aaKnown RBP18.51■□□□□ 0.55
SMAD3-210ENST00000559092 LY6G5CQ5SRR4 150 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 BTBD8Q5XKL5 378 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 LCLAT1Q6UWP7 414 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 BBS7Q8IWZ6 715 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 RPLP0P6Q8NHW5 317 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 HINFPQ9BQA5 517 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 SPHK2Q9NRA0 654 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 LSM7Q9UK45 103 aaKnown RBP18.51■□□□□ 0.55
SMAD3-210ENST00000559092 TSPAN16Q9UKR8 245 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 ANAPC1Q9H1A4 1944 aa18.51■□□□□ 0.55
SMAD3-210ENST00000559092 O00370 1275 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 ZBED1O96006 694 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 SETSIPP0DME0 302 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 GRIA2P42262 883 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 MRPS21P82921 87 aaKnown RBP18.5■□□□□ 0.55
SMAD3-210ENST00000559092 COG7P83436 770 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 PDE4CQ08493 712 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 SIM2Q14190 667 aaPredicted RBP18.5■□□□□ 0.55
SMAD3-210ENST00000559092 STILQ15468 1287 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 GOLGA7BQ2TAP0 167 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 HSF5Q4G112 596 aaPredicted RBP18.5■□□□□ 0.55
SMAD3-210ENST00000559092 TMEM270Q6UE05 265 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 USP33Q8TEY7 942 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 CLSTN2Q9H4D0 955 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 NCDNQ9UBB6 729 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 PCDHB4Q9Y5E5 795 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 OTOGLQ3ZCN5 2332 aa18.5■□□□□ 0.55
SMAD3-210ENST00000559092 APODP05090 189 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 IRF1P10914 325 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 TNFRSF4P43489 277 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 SLC6A11P48066 632 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 TKTL1P51854 596 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 CNGA2Q16280 664 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 PKDCCQ504Y2 493 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 HEATR6Q6AI08 1181 aaKnown RBP18.49■□□□□ 0.55
SMAD3-210ENST00000559092 LAIR1Q6GTX8 287 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 ETFBKMTQ8IXQ9 262 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 KCNV2Q8TDN2 545 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 KCTD13Q8WZ19 329 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 WBP2Q969T9 261 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 WDR35Q9P2L0 1181 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 EBF1Q9UH73 591 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 ZNF510Q9Y2H8 683 aa18.49■□□□□ 0.55
SMAD3-210ENST00000559092 KAT7O95251 611 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 YWHAGP61981 247 aaKnown RBP eCLIP18.48■□□□□ 0.55
SMAD3-210ENST00000559092 DMC1Q14565 340 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 SMYD5Q6GMV2 418 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 NUDT18Q6ZVK8 323 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 RRAGAQ7L523 313 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 TMEM25Q86YD3 366 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 SCML4Q8N228 414 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 FAM81BQ96LP2 452 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 DCLK3Q9C098 648 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 INTS2Q9H0H0 1204 aaKnown RBP18.48■□□□□ 0.55
SMAD3-210ENST00000559092 LRRC4Q9HBW1 653 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 ARHGEF4Q9NR80 690 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 MARK1Q9P0L2 795 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 DEC1Q9P2X7 70 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 GMEB2Q9UKD1 530 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 CNTN6Q9UQ52 1028 aa18.48■□□□□ 0.55
SMAD3-210ENST00000559092 RNF225M0QZC1 329 aaPredicted RBP18.47■□□□□ 0.55
SMAD3-210ENST00000559092 APBB3O95704 486 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 RETP07949 1114 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 ZNF132P52740 706 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 ANO4Q32M45 955 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 C2orf27AQ580R0 203 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 Q6ZNB5 142 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 RSRC2Q7L4I2 434 aaKnown RBP18.47■□□□□ 0.55
SMAD3-210ENST00000559092 ENOSF1Q7L5Y1 443 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 MIB1Q86YT6 1006 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 DCLK2Q8N568 766 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 UBA3Q8TBC4 463 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 SLC35F5Q8WV83 523 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 GAB3Q8WWW8 586 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 TFAP2BQ92481 460 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 KAT5Q92993 513 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 IPO9Q96P70 1041 aaKnown RBP18.47■□□□□ 0.55
SMAD3-210ENST00000559092 MED15Q96RN5 788 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 ULBP1Q9BZM6 244 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 NUDT5Q9UKK9 219 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 STRIP2Q9ULQ0 834 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMAD3-210ENST00000559092 ZNF638Q14966 1978 aaKnown RBP18.47■□□□□ 0.55
SMAD3-210ENST00000559092 FANCMQ8IYD8 2048 aa18.47■□□□□ 0.55
SMAD3-210ENST00000559092 TULP2O00295 520 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 MDM4O15151 490 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 LRP3O75074 770 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 STC2O76061 302 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 PRR23BQ6ZRT6 265 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 CEP68Q76N32 757 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 C12orf40Q86WS4 652 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 ARHGEF19Q8IW93 802 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms