RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 CDC42EP1Q00587 391 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 PRKCZQ05513 592 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 ANKRD1Q15327 319 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 NPY5RQ15761 445 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 ARHGEF18Q6ZSZ5 1173 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 DRC7Q8IY82 874 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 CMTM4Q8IZR5 234 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 FAM133AQ8N9E0 248 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 NSUN7Q8NE18 718 aaKnown RBP6.8□□□□□ -1.32
LRRC28-209ENST00000558861 CHST13Q8NET6 341 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 OR5M3Q8NGP4 307 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 NSUN6Q8TEA1 469 aaKnown RBP6.8□□□□□ -1.32
LRRC28-209ENST00000558861 TBC1D5Q92609 795 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 C1GALT1C1Q96EU7 318 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 ERO1AQ96HE7 468 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 KCNC2Q96PR1 638 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 MROH8Q9H579 483 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 MANSC1Q9H8J5 431 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 UPF2Q9HAU5 1272 aaKnown RBP6.8□□□□□ -1.32
LRRC28-209ENST00000558861 A1CFQ9NQ94 594 aaKnown RBP6.8□□□□□ -1.32
LRRC28-209ENST00000558861 SRRDQ9UH36 339 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 AJAP1Q9UKB5 411 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-209ENST00000558861 GABRQQ9UN88 632 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 A0A1W2PRX2 142 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 UBE2QL1A1L167 161 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 SLC15A5A6NIM6 579 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 A6NNZ2 444 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 STRNO43815 780 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 JAK2O60674 1132 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 GASTP01350 101 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 CR2P20023 1033 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 FPR1P21462 350 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 PCSK1P29120 753 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 ADORA2AP29274 412 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 PTPN7P35236 360 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 COPB2P35606 906 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 FLT3LGP49771 235 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 HSD17B4P51659 736 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 CCNA1P78396 465 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 CUL4AQ13619 759 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 GALEQ14376 348 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 GBX1Q14549 363 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 PFKFB3Q16875 520 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-209ENST00000558861 PPP4R3AQ6IN85 833 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 CCDC174Q6PII3 467 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 OVCH2Q7RTZ1 564 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 CTU1Q7Z7A3 348 aaKnown RBP6.79□□□□□ -1.32
LRRC28-209ENST00000558861 DENND1CQ8IV53 801 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 CPXCR1Q8N123 301 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 NECAB1Q8N987 351 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 STON2Q8WXE9 905 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 PHKBQ93100 1093 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 SNX21Q969T3 373 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 RGMAQ96B86 450 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 TMX3Q96JJ7 454 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 CLPTM1LQ96KA5 538 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 RNF26Q9BY78 433 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-209ENST00000558861 SENP6Q9GZR1 1112 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-209ENST00000558861 MAF1Q9H063 256 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 ENKD1Q9H0I2 346 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 VAT1LQ9HCJ6 419 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 C1orf112Q9NSG2 853 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 RNF146Q9NTX7 359 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 CYP39A1Q9NYL5 469 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 FLRT1Q9NZU1 646 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 COL20A1Q9P218 1284 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 CCPG1Q9ULG6 757 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 LCTP09848 1927 aa6.79□□□□□ -1.32
LRRC28-209ENST00000558861 FRMPD4Q14CM0 1322 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 STK36Q9NRP7 1315 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 CCDC196A0A1B0GTZ2 297 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 OTOL1A6NHN0 477 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-209ENST00000558861 H3BML4 177 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 MEIS2O14770 477 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 TNPO2O14787 897 aaKnown RBP6.78□□□□□ -1.32
LRRC28-209ENST00000558861 LAMTOR5O43504 91 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 SGTAO43765 313 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 EDIL3O43854 480 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 GPR32O75388 356 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 STC2O76061 302 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 FTLP02792 175 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-209ENST00000558861 MAP2K6P52564 334 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 EPHB4P54760 987 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 PRMT2P55345 433 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 NPEPPSP55786 919 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 CNTN2Q02246 1040 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 IKQ13123 557 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-209ENST00000558861 STK3Q13188 491 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 PLS1Q14651 629 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 FAM214AQ32MH5 1076 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 MAP3K21Q5TCX8 1036 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 SLC30A10Q6XR72 485 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 SYNE3Q6ZMZ3 975 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 TTC7BQ86TV6 843 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 RSPH3Q86UC2 560 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 IFI44Q8TCB0 444 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 MORC4Q8TE76 937 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 SOCS4Q8WXH5 440 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 TRIB2Q92519 343 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 RRP36Q96EU6 259 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms