RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 CACNA2D4Q7Z3S7 1137 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 TMEM150AQ86TG1 271 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 CMTM8Q8IZV2 173 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 ZCCHC14Q8WYQ9 949 aaKnown RBP10.41□□□□□ -0.74
SPG11-212ENST00000558790 KCNN1Q92952 543 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 TCEAL3Q969E4 200 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 LOXL4Q96JB6 756 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 FAM83CQ9BQN1 747 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 MSTO1Q9BUK6 570 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 SLC46A2Q9BY10 475 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 ADAM19Q9H013 955 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 EBF3Q9H4W6 596 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 VTI1BQ9UEU0 232 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 KCNG1Q9UIX4 513 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 CPSF3Q9UKF6 684 aaKnown RBP10.41□□□□□ -0.74
SPG11-212ENST00000558790 MKL2Q9ULH7 1088 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 TBX20Q9UMR3 447 aa10.41□□□□□ -0.74
SPG11-212ENST00000558790 USP9XQ93008 2570 aaPredicted RBP10.4□□□□□ -0.74
SPG11-212ENST00000558790 CCDC163A0A0D9SF12 145 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 ANO9A1A5B4 782 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 TISP43B9A030 160 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 LINC01387J3KSC0 135 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 PIRO00625 290 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 ARSAP15289 507 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 MPLP40238 635 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 TUFMP49411 452 aaKnown RBP10.4□□□□□ -0.74
SPG11-212ENST00000558790 GRSF1Q12849 480 aaKnown RBP eCLIP10.4□□□□□ -0.74
SPG11-212ENST00000558790 RUNX3Q13761 415 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 STPG1Q5TH74 334 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 VN1R5Q7Z5H4 357 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 LRRTM3Q86VH5 581 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 GPBP1Q86WP2 473 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 MAB21L3Q8N8X9 362 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 USP13Q92995 863 aaPredicted RBP10.4□□□□□ -0.74
SPG11-212ENST00000558790 CDK5RAP3Q96JB5 506 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 TSPAN18Q96SJ8 248 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 PYM1Q9BRP8 204 aaKnown RBP10.4□□□□□ -0.74
SPG11-212ENST00000558790 GKN1Q9NS71 199 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 THG1LQ9NWX6 298 aaKnown RBP10.4□□□□□ -0.74
SPG11-212ENST00000558790 ODF2LQ9ULJ1 636 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 SLC8A2Q9UPR5 921 aa10.4□□□□□ -0.74
SPG11-212ENST00000558790 FAM229AH3BQW9 127 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 TRDMT1O14717 391 aaKnown RBP10.39□□□□□ -0.75
SPG11-212ENST00000558790 TADA3O75528 432 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 AKAP3O75969 853 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 HAPLN1P10915 354 aaPredicted RBP10.39□□□□□ -0.75
SPG11-212ENST00000558790 HMGA1P17096 107 aaKnown RBP10.39□□□□□ -0.75
SPG11-212ENST00000558790 AVPR1AP37288 418 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 GPR15P49685 360 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 ACOT2P49753 483 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 TAF6P49848 677 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 ZNF131P52739 623 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 NLRP12P59046 1061 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 BFSP1Q12934 665 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 TAF12Q16514 161 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 PLK5Q496M5 336 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 RILPL1Q5EBL4 403 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 WSCD1Q658N2 575 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 HGSNATQ68CP4 663 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 MCTP1Q6DN14 999 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 CD302Q8IX05 232 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 EFCAB13Q8IY85 973 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 SPPL2BQ8TCT7 592 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 C2orf15Q8WU43 125 aaKnown RBP10.39□□□□□ -0.75
SPG11-212ENST00000558790 ZC3H10Q96K80 434 aaKnown RBP10.39□□□□□ -0.75
SPG11-212ENST00000558790 ZSCAN31Q96LW9 406 aaPredicted RBP10.39□□□□□ -0.75
SPG11-212ENST00000558790 FRMD6Q96NE9 622 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 FIZ1Q96SL8 496 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 KIF9Q9HAQ2 790 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 PARVGQ9HBI0 331 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 FBRSL1Q9HCM7 1045 aaKnown RBP10.39□□□□□ -0.75
SPG11-212ENST00000558790 TMLHEQ9NVH6 421 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 DSEQ9UL01 958 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 DERAQ9Y315 318 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 PCDHGA5Q9Y5G8 931 aa10.39□□□□□ -0.75
SPG11-212ENST00000558790 ASXL3Q9C0F0 2248 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 SHROOM3Q8TF72 1996 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 ANKRD63C9JTQ0 380 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 CYB561D2O14569 222 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 GNB5O14775 395 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 ATG13O75143 517 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 ITPKAP23677 461 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 PAX3P23760 479 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 DDX6P26196 483 aaKnown RBP eCLIP10.38□□□□□ -0.75
SPG11-212ENST00000558790 DHX8Q14562 1220 aaKnown RBP10.38□□□□□ -0.75
SPG11-212ENST00000558790 PTPAQ15257 358 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 SDHAF4Q5VUM1 108 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 TXNDC8Q6A555 127 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 METTL23Q86XA0 190 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 MYCT1Q8N699 235 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 RPLP0P6Q8NHW5 317 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 EZH1Q92800 747 aaPredicted RBP10.38□□□□□ -0.75
SPG11-212ENST00000558790 KIF2CQ99661 725 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 EDEM2Q9BV94 578 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 LSM14BQ9BX40 385 aaKnown RBP10.38□□□□□ -0.75
SPG11-212ENST00000558790 CCSER1Q9C0I3 900 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 DUSP15Q9H1R2 295 aaPredicted RBP10.38□□□□□ -0.75
SPG11-212ENST00000558790 IKZF4Q9H2S9 585 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 VPS45Q9NRW7 570 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 BLOC1S4Q9NUP1 217 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms