RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 DENND5BQ6ZUT9 1274 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 TSC1Q92574 1164 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 BHMTQ93088 406 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 IGSF8Q969P0 613 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 C17orf75Q9HAS0 396 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 CRTAC1Q9NQ79 661 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 ITM2CQ9NQX7 267 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 C2CD2Q9Y426 696 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 PCDHGA1Q9Y5H4 931 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 CELSR2Q9HCU4 2923 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 ANKRD63C9JTQ0 380 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 TERTO14746 1132 aaKnown RBP12.65□□□□□ -0.38
SMAD3-206ENST00000558739 COCHO43405 550 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 GUCY2CP25092 1073 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 LMO2P25791 158 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 ACTN2P35609 894 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 MAGEA11P43364 429 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 NCKAP1LP55160 1127 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 NFATC3Q12968 1075 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 SDE2Q6IQ49 451 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 KIAA1958Q8N8K9 716 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 FUBP3Q96I24 572 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMAD3-206ENST00000558739 HIC2Q96JB3 615 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 CNDP2Q96KP4 475 aaKnown RBP12.65□□□□□ -0.38
SMAD3-206ENST00000558739 SPATA17Q96L03 361 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 TSPAN18Q96SJ8 248 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 TBC1D14Q9P2M4 693 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 ANKMY1Q9P2S6 941 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 DNM3Q9UQ16 869 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 DERAQ9Y315 318 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 PCDHB1Q9Y5F3 818 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 CYP46A1Q9Y6A2 500 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 STON1Q9Y6Q2 735 aa12.65□□□□□ -0.38
SMAD3-206ENST00000558739 RP1L1Q8IWN7 2480 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-206ENST00000558739 F8VP50 259 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 CACNG3O60359 315 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 JAK2O60674 1132 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 PFKFB2O60825 505 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 ITGB3P05106 788 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 PFKLP17858 780 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 CTSKP43235 329 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMAD3-206ENST00000558739 COPAP53621 1224 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 SMTNP53814 917 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 MYL7Q01449 175 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 GUCY1B3Q02153 619 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 SHBQ15464 509 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 C6orf132Q5T0Z8 1188 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 FAM171BQ6P995 826 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 METTL3Q86U44 580 aaKnown RBP12.64□□□□□ -0.39
SMAD3-206ENST00000558739 TMPRSS6Q8IU80 811 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 CD302Q8IX05 232 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 ADGRF2Q8IZF7 708 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 C4orf32Q8N8J7 132 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 NECAB1Q8N987 351 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 CXorf38Q8TB03 319 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 SCFD1Q8WVM8 642 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 ORAI3Q9BRQ5 295 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 MMTAG2Q9BU76 263 aaKnown RBP12.64□□□□□ -0.39
SMAD3-206ENST00000558739 CCSER2Q9H7U1 834 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-206ENST00000558739 PCDHB6Q9Y5E3 794 aa12.64□□□□□ -0.39
SMAD3-206ENST00000558739 ZFHX3Q15911 3703 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 GABRDO14764 452 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 LDOC1O95751 146 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-206ENST00000558739 IGLV3-19P01714 112 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 PIGRP01833 764 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 MPOP05164 745 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 TYRP14679 529 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 ACSL1P33121 698 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 GRIA4P48058 902 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 PCBP4P57723 403 aaKnown RBP12.63□□□□□ -0.39
SMAD3-206ENST00000558739 IRX6P78412 446 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-206ENST00000558739 ZRSR1Q15695 479 aaKnown RBP12.63□□□□□ -0.39
SMAD3-206ENST00000558739 KYAT1Q16773 422 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 CRELD2Q6UXH1 353 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-206ENST00000558739 TPGS1Q6ZTW0 290 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 C1orf127Q8N9H9 656 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 ZNF248Q8NDW4 579 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 ZSWIM2Q8NEG5 633 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 ENGASEQ8NFI3 743 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 KBTBD7Q8WVZ9 684 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 ZNF560Q96MR9 790 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 PLIN2Q99541 437 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 SYT15Q9BQS2 421 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 BBS2Q9BXC9 721 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 AGAP1Q9UPQ3 857 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 NME7Q9Y5B8 376 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 SNX9Q9Y5X1 595 aa12.63□□□□□ -0.39
SMAD3-206ENST00000558739 KIF26BQ2KJY2 2108 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 K7ENM7 598 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 TULP1O00294 542 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-206ENST00000558739 GREM1O60565 184 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 HUS1O60921 280 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 CISD3P0C7P0 127 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 PLCG1P19174 1290 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 GLDCP23378 1020 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 PGFP49763 221 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 NOP14P78316 857 aaKnown RBP12.62□□□□□ -0.39
SMAD3-206ENST00000558739 CYP27A1Q02318 531 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms