RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 HSD17B7P56937 341 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 CDK16Q00536 496 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 IFITM3Q01628 133 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 AARS2Q5JTZ9 985 aaKnown RBP11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 EPM2AIP1Q7L775 607 aaPredicted RBP11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 GIMAP8Q8ND71 665 aaPredicted RBP11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 SHCBP1Q8NEM2 672 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 PJA1Q8NG27 643 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 BAP1Q92560 729 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 OPALINQ96PE5 141 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 THTPAQ9BU02 230 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 NWD2Q9ULI1 1742 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 TOMM70O94826 608 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 BLVRAP53004 296 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 TRPC3Q13507 836 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 ZYXQ15942 572 aaKnown RBP11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 FBXO43Q4G163 708 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 HABP4Q5JVS0 413 aaKnown RBP11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 ZBTB46Q86UZ6 589 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 ZNF677Q86XU0 584 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 ZSCAN29Q8IWY8 852 aaPredicted RBP11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 OR5H6Q8NGV6 325 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 LPGAT1Q92604 370 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 ZSCAN5AQ9BUG6 496 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 PACSIN1Q9BY11 444 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 NUP50Q9UKX7 468 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 DIMT1Q9UNQ2 313 aaKnown RBP11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 CACNG2Q9Y698 323 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 ZNFX1Q9P2E3 1918 aaKnown RBP11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 ZMYM2Q9UBW7 1377 aa11.42□□□□□ -0.58
SEMA4B-204ENST00000558065 PIK3C2AO00443 1686 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 FAM47DPA6NHR8 397 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 TOM1O60784 492 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 ITIH1P19827 911 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 FAM91A1Q658Y4 838 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 PCGF5Q86SE9 256 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 FANCBQ8NB91 859 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 DCTN4Q9UJW0 460 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 PCDHA3Q9Y5H8 950 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 ZNF804BA4D1E1 1349 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 TEX51A0A1B0GUA7 166 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 DNAJB2P25686 324 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 RPL21P46778 160 aaKnown RBP11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 MLLT10P55197 1068 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 CDKL1Q00532 357 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 RUNX1T1Q06455 604 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 PTPROQ16827 1216 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 C6orf52Q5T4I8 152 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 ZNF618Q5T7W0 954 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 ZFPM1Q8IX07 1006 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 NEDD1Q8NHV4 660 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 NCOA7Q8NI08 942 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 GTF3C2Q8WUA4 911 aaPredicted RBP11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 LRRC59Q96AG4 307 aaKnown RBP11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 DEPDC7Q96QD5 511 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 ZNF341Q9BYN7 854 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 DTLQ9NZJ0 730 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 LGALS13Q9UHV8 139 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 CROCCQ5TZA2 2017 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 ALDH1A3P47895 512 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 NFIAQ12857 509 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 PERM1Q5SV97 790 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 DCPSQ96C86 337 aaKnown RBP11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 EAF2Q96CJ1 260 aaPredicted RBP11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 EYA1Q99502 592 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 TMEM79Q9BSE2 394 aa11.41□□□□□ -0.58
SEMA4B-204ENST00000558065 CRB1P82279 1406 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 MTSS1O43312 755 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 SELLP14151 372 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 NAMPTP43490 491 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 DNASE1L3Q13609 305 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 CAVIN4Q5BKX8 364 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 CCNJQ5T5M9 372 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 GALNT18Q6P9A2 607 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 JAMLQ86YT9 394 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 HERC6Q8IVU3 1022 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 CADM2Q8N3J6 435 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 CEP95Q96GE4 821 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 TRIM15Q9C019 465 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 KCNK13Q9HB14 408 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 ERVK-5Q9HDB9 667 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 RNF11Q9Y3C5 154 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 ACTL7BQ9Y614 415 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 KLF18A0A0U1RQI7 1052 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 GREM1O60565 184 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 ATG13O75143 517 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 ADCY7P51828 1080 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 ZBED5Q49AG3 693 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 BRDTQ58F21 947 aaPredicted RBP11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 SLC10A5Q5PT55 438 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 C6orf10Q5SRN2 563 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 PPP1R26Q5T8A7 1209 aaPredicted RBP11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 RNASEH2BQ5TBB1 312 aaKnown RBP11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 TPH2Q8IWU9 490 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 UNC45BQ8IWX7 931 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 ZNF34Q8IZ26 560 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 LRRC71Q8N4P6 559 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 TTC13Q8NBP0 860 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 OR7D4Q8NG98 312 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms