RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 P4HA1P13674 534 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 MAP3K7CLP57077 242 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 ZNF252P-AS1Q0IIN9 211 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 LMAN2Q12907 356 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 ANO4Q32M45 955 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 KMT5BQ4FZB7 885 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 C1orf220Q5T0J3 134 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 C10orf76Q5T2E6 689 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 PEAR1Q5VY43 1037 aaPredicted RBP16.86■□□□□ 0.29
SCFD1-224ENST00000557713 SLC23A3Q6PIS1 610 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 NUDT18Q6ZVK8 323 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 ARMCX6Q7L4S7 300 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 TRMT11Q7Z4G4 463 aaKnown RBP16.86■□□□□ 0.29
SCFD1-224ENST00000557713 PGBD3Q8N328 593 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 TLR8Q9NR97 1041 aaKnown RBP16.86■□□□□ 0.29
SCFD1-224ENST00000557713 OSER1Q9NX31 292 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 PILRBQ9UKJ0 227 aa16.86■□□□□ 0.29
SCFD1-224ENST00000557713 TNRC6BQ9UPQ9 1833 aaKnown RBP16.86■□□□□ 0.29
SCFD1-224ENST00000557713 A0A1W2PQF6 199 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 HHLA1C9JL84 531 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 CLSTN1O94985 981 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 NR3C1P04150 777 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 GABRG2P18507 467 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 NTSR1P30989 418 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 ASPAP45381 313 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 SPOPLQ6IQ16 392 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 MIB1Q86YT6 1006 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 HNRNPABQ99729 332 aaKnown RBP16.85■□□□□ 0.29
SCFD1-224ENST00000557713 NUSAP1Q9BXS6 441 aaKnown RBP16.85■□□□□ 0.29
SCFD1-224ENST00000557713 NACA2Q9H009 215 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 CD248Q9HCU0 757 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 CYLDQ9NQC7 956 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 FAM49BQ9NUQ9 324 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 EXOC1Q9NV70 894 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 CFAP45Q9UL16 551 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 SCML2Q9UQR0 700 aa16.85■□□□□ 0.29
SCFD1-224ENST00000557713 PLXND1Q9Y4D7 1925 aa16.84■□□□□ 0.29
SCFD1-224ENST00000557713 ITPKAP23677 461 aa16.84■□□□□ 0.29
SCFD1-224ENST00000557713 ATP5C1P36542 298 aaKnown RBP16.84■□□□□ 0.29
SCFD1-224ENST00000557713 DPP6P42658 865 aa16.84■□□□□ 0.29
SCFD1-224ENST00000557713 UAP1L1Q3KQV9 507 aa16.84■□□□□ 0.29
SCFD1-224ENST00000557713 LYSMD4Q5XG99 296 aa16.84■□□□□ 0.29
SCFD1-224ENST00000557713 CLEC20AQ6ZU45 233 aa16.84■□□□□ 0.29
SCFD1-224ENST00000557713 GPRIN1Q7Z2K8 1008 aa16.84■□□□□ 0.29
SCFD1-224ENST00000557713 TWNKQ96RR1 684 aa16.84■□□□□ 0.29
SCFD1-224ENST00000557713 MARK1Q9P0L2 795 aa16.84■□□□□ 0.29
SCFD1-224ENST00000557713 WDR35Q9P2L0 1181 aa16.84■□□□□ 0.29
SCFD1-224ENST00000557713 CEP295Q9C0D2 2601 aa16.83■□□□□ 0.29
SCFD1-224ENST00000557713 C1QTNF9BB2RNN3 333 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 AP5Z1O43299 807 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 CACNG3O60359 315 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 TOP3BO95985 862 aaKnown RBP16.83■□□□□ 0.28
SCFD1-224ENST00000557713 HLA-DRAP01903 254 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 C1QTNF9P0C862 333 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 FAM200BP0CF97 657 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 HOXB2P14652 356 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 ENGP17813 658 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 ADORA2BP29275 332 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 HOXD12P35452 270 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 WASP42768 502 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 DNM1Q05193 864 aaKnown RBP16.83■□□□□ 0.28
SCFD1-224ENST00000557713 INCA1Q0VD86 236 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 FOXC1Q12948 553 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 PKP1Q13835 747 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 FRYQ5TBA9 3013 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 EGFLAMQ63HQ2 1017 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 GRAMD4Q6IC98 578 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 SLC36A4Q6YBV0 504 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 DEFB124Q8NES8 71 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 CYFIP2Q96F07 1278 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 XPO6Q96QU8 1125 aaKnown RBP16.83■□□□□ 0.28
SCFD1-224ENST00000557713 ACOX2Q99424 681 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 BBS2Q9BXC9 721 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 NMUR1Q9HB89 426 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 DNAJC17Q9NVM6 304 aaKnown RBP16.83■□□□□ 0.28
SCFD1-224ENST00000557713 CALCOCO1Q9P1Z2 691 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 TRAF3IP3Q9Y228 551 aa16.83■□□□□ 0.28
SCFD1-224ENST00000557713 ATXN2Q99700 1313 aaKnown RBP16.82■□□□□ 0.28
SCFD1-224ENST00000557713 PRRT4C9JH25 899 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 NEDD8-MDP1E9PL57 170 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 MAPK13O15264 365 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 CYP26A1O43174 497 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 CISD3P0C7P0 127 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 TYRP14679 529 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 ACO1P21399 889 aaKnown RBP16.82■□□□□ 0.28
SCFD1-224ENST00000557713 MAPK8P45983 427 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 RPL6Q02878 288 aaKnown RBP16.82■□□□□ 0.28
SCFD1-224ENST00000557713 CEP135Q66GS9 1140 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 KLHDC10Q6PID8 442 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 UNQ6494/PRO21346Q6UXR6 183 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 TPGS1Q6ZTW0 290 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 DEFB119Q8N690 84 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 GABRG3Q99928 467 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 TMEM121BQ9BXQ6 578 aaPredicted RBP16.82■□□□□ 0.28
SCFD1-224ENST00000557713 APOBEC3GQ9HC16 384 aaKnown RBP16.82■□□□□ 0.28
SCFD1-224ENST00000557713 PNPLA8Q9NP80 782 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.82■□□□□ 0.28
SCFD1-224ENST00000557713 SLC6A14Q9UN76 642 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 FRMD4BQ9Y2L6 1034 aa16.82■□□□□ 0.28
SCFD1-224ENST00000557713 IGHV1OR15-9A0A0B4J2B8 117 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms