RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 SDHBP21912 280 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 BMP6P22004 513 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 TNFRSF4P43489 277 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 ID4P47928 161 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 DMWDQ09019 674 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 BST2Q10589 180 aaKnown RBP11.35□□□□□ -0.59
XRCC3-216ENST00000556682 KCNH2Q12809 1159 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 DMC1Q14565 340 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 STILQ15468 1287 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 GOLGA7BQ2TAP0 167 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 C2orf27AQ580R0 203 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 NAIF1Q69YI7 327 aaPredicted RBP11.35□□□□□ -0.59
XRCC3-216ENST00000556682 PKN3Q6P5Z2 889 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 TMEM270Q6UE05 265 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 RSRC2Q7L4I2 434 aaKnown RBP11.35□□□□□ -0.59
XRCC3-216ENST00000556682 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.35□□□□□ -0.59
XRCC3-216ENST00000556682 BBS7Q8IWZ6 715 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 EHBP1Q8NDI1 1231 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 TSTD1Q8NFU3 115 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 USP33Q8TEY7 942 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 GAB3Q8WWW8 586 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 IPO9Q96P70 1041 aaKnown RBP11.35□□□□□ -0.59
XRCC3-216ENST00000556682 XPO6Q96QU8 1125 aaKnown RBP11.35□□□□□ -0.59
XRCC3-216ENST00000556682 NMUR1Q9HB89 426 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 ARHGEF4Q9NR80 690 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 SPHK2Q9NRA0 654 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 OSER1Q9NX31 292 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 WDR35Q9P2L0 1181 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 DEC1Q9P2X7 70 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 EBF1Q9UH73 591 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 TSPAN16Q9UKR8 245 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 STRIP2Q9ULQ0 834 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 PCDHB4Q9Y5E5 795 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 PATJQ8NI35 1801 aa11.35□□□□□ -0.59
XRCC3-216ENST00000556682 RIF1Q5UIP0 2472 aaKnown RBP11.34□□□□□ -0.59
XRCC3-216ENST00000556682 OBSL1O75147 1896 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 TBC1D3BA6NDS4 549 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 PRR5-ARHGAP8B1AHC4 643 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 K7EQS6 105 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 XPO1O14980 1071 aaKnown RBP11.34□□□□□ -0.59
XRCC3-216ENST00000556682 AXIN1O15169 862 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 HOXC11O43248 304 aaPredicted RBP11.34□□□□□ -0.59
XRCC3-216ENST00000556682 FOXD2O60548 495 aaPredicted RBP11.34□□□□□ -0.59
XRCC3-216ENST00000556682 LRP3O75074 770 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 RPP40O75818 363 aaKnown RBP11.34□□□□□ -0.59
XRCC3-216ENST00000556682 ALDH1A2O94788 518 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 ZBED1O96006 694 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 SETSIPP0DME0 302 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 SLC6A11P48066 632 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 PXNP49023 591 aaPredicted RBP11.34□□□□□ -0.59
XRCC3-216ENST00000556682 PGFP49763 221 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 TKTL1P51854 596 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 SEC13P55735 322 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 MARSP56192 900 aaKnown RBP11.34□□□□□ -0.59
XRCC3-216ENST00000556682 ARHGAP8P85298 464 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 GCNT1Q02742 428 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 LPAL2Q16609 132 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 GAB4Q2WGN9 574 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 RAB41Q5JT25 222 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 CACNA2D4Q7Z3S7 1137 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 TRMT11Q7Z4G4 463 aaKnown RBP11.34□□□□□ -0.59
XRCC3-216ENST00000556682 CREBRFQ8IUR6 639 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 TRIM59Q8IWR1 403 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 NAT16Q8N8M0 369 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 MLKLQ8NB16 471 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 EZH1Q92800 747 aaPredicted RBP11.34□□□□□ -0.59
XRCC3-216ENST00000556682 HHIPQ96QV1 700 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 DCLK3Q9C098 648 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 OLA1Q9NTK5 396 aaKnown RBP11.34□□□□□ -0.59
XRCC3-216ENST00000556682 RWDD2AQ9UIY3 292 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 NUDT5Q9UKK9 219 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 USP18Q9UMW8 372 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 GREB1Q4ZG55 1949 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 FAM186AA6NE01 2351 aa11.34□□□□□ -0.59
XRCC3-216ENST00000556682 TIE1P35590 1138 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 CHKAP35790 457 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 DGKEP52429 567 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 YWHAGP61981 247 aaKnown RBP eCLIP11.33□□□□□ -0.6
XRCC3-216ENST00000556682 FOXK2Q01167 660 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 LMNB2Q03252 620 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 KDSRQ06136 332 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 PDE4CQ08493 712 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 EFEMP1Q12805 493 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 CNGA2Q16280 664 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 TPD52L1Q16890 204 aaPredicted RBP11.33□□□□□ -0.6
XRCC3-216ENST00000556682 USP39Q53GS9 565 aaKnown RBP11.33□□□□□ -0.6
XRCC3-216ENST00000556682 EOGTQ5NDL2 527 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 PM20D1Q6GTS8 502 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 LCLAT1Q6UWP7 414 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 SCD5Q86SK9 330 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 C11orf74Q86VG3 221 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 TTC30AQ86WT1 665 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 TMEM25Q86YD3 366 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 MIB1Q86YT6 1006 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 SIX6OS1Q8N1H7 587 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 UBR7Q8N806 425 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 RNF139Q8WU17 664 aa11.33□□□□□ -0.6
XRCC3-216ENST00000556682 KCTD13Q8WZ19 329 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms