RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 CD101Q93033 1021 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 SECISBP2LQ93073 1101 aaKnown RBP8.53□□□□□ -1.04
VTI1B-206ENST00000556461 NKD2Q969F2 451 aaPredicted RBP8.53□□□□□ -1.04
VTI1B-206ENST00000556461 UBXN6Q9BZV1 441 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 NACA2Q9H009 215 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 SIX2Q9NPC8 291 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 UBE2TQ9NPD8 197 aaPredicted RBP8.53□□□□□ -1.04
VTI1B-206ENST00000556461 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.53□□□□□ -1.04
VTI1B-206ENST00000556461 ATG2BQ96BY7 2078 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 MYOFQ9NZM1 2061 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 MYO16Q9Y6X6 1858 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 YJEFN3A6XGL0 299 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 BECN2A8MW95 431 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 CHURC1-FNTBB4DL54 471 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 E7ENQ6 273 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 K7EQS6 105 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 TRIM24O15164 1050 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 LILRB5O75023 590 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 KLKB1P03952 638 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 HMBSP08397 361 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 LCP1P13796 627 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 DRD1P21728 446 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 ATP5C1P36542 298 aaKnown RBP8.52□□□□□ -1.05
VTI1B-206ENST00000556461 MTIF2P46199 727 aaKnown RBP8.52□□□□□ -1.05
VTI1B-206ENST00000556461 PLA2G4AP47712 749 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 PXNP49023 591 aaPredicted RBP8.52□□□□□ -1.05
VTI1B-206ENST00000556461 FNTBP49356 437 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 CCR3P51677 355 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 BCAT1P54687 386 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 SEC13P55735 322 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 YWHAGP61981 247 aaKnown RBP eCLIP8.52□□□□□ -1.05
VTI1B-206ENST00000556461 ADIGQ0VDE8 80 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 BST2Q10589 180 aaKnown RBP8.52□□□□□ -1.05
VTI1B-206ENST00000556461 EFEMP1Q12805 493 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 SRSF5Q13243 272 aaKnown RBP8.52□□□□□ -1.05
VTI1B-206ENST00000556461 CNGA2Q16280 664 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 MIIPQ5JXC2 388 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 PM20D1Q6GTS8 502 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 PMF1Q6P1K2 205 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 DENND1BQ6P3S1 775 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 TRIM65Q6PJ69 517 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 RBM43Q6ZSC3 357 aaKnown RBP8.52□□□□□ -1.05
VTI1B-206ENST00000556461 DDX42Q86XP3 938 aaKnown RBP eCLIP8.52□□□□□ -1.05
VTI1B-206ENST00000556461 MIB1Q86YT6 1006 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 SYNPOQ8N3V7 929 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 KIAA1958Q8N8K9 716 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 NAT16Q8N8M0 369 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 SUMF1Q8NBK3 374 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 CLEC4CQ8WTT0 213 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 SLC35F5Q8WV83 523 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 GBP4Q96PP9 640 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 IER2Q9BTL4 223 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 DNAI2Q9GZS0 605 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 THAP9Q9H5L6 903 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 ZDHHC4Q9NPG8 344 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 SAMSN1Q9NSI8 373 aaKnown RBP8.52□□□□□ -1.05
VTI1B-206ENST00000556461 ZSCAN32Q9NX65 697 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 HESX1Q9UBX0 185 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 RASAL2Q9UJF2 1139 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 DNMT3LQ9UJW3 386 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 KIAA1257Q9ULG3 409 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 CNTN6Q9UQ52 1028 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 SH3BP1Q9Y3L3 701 aa8.52□□□□□ -1.05
VTI1B-206ENST00000556461 FANCMQ8IYD8 2048 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 M0QYV0 167 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 SLC9A3R1O14745 358 aaPredicted RBP8.51□□□□□ -1.05
VTI1B-206ENST00000556461 STC2O76061 302 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 PAPSS2O95340 614 aaPredicted RBP8.51□□□□□ -1.05
VTI1B-206ENST00000556461 ZBED1O96006 694 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 LMNAP02545 664 aaKnown RBP8.51□□□□□ -1.05
VTI1B-206ENST00000556461 PNMA6AP0CW24 399 aaPredicted RBP8.51□□□□□ -1.05
VTI1B-206ENST00000556461 SETSIPP0DME0 302 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 RALAP11233 206 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 ADH5P11766 374 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 KRT5P13647 590 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 PON1P27169 355 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 ERCC5P28715 1186 aaPredicted RBP8.51□□□□□ -1.05
VTI1B-206ENST00000556461 AMPD2Q01433 879 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 KDSRQ06136 332 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 KCNMA1Q12791 1236 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 NR1H3Q13133 447 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 MAN2A1Q16706 1144 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 TPD52L1Q16890 204 aaPredicted RBP8.51□□□□□ -1.05
VTI1B-206ENST00000556461 ARHGAP44Q17R89 818 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 EXOC3L4Q17RC7 722 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 VWA3BQ502W6 1294 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 EMC10Q5UCC4 262 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 HEATR6Q6AI08 1181 aaKnown RBP8.51□□□□□ -1.05
VTI1B-206ENST00000556461 KLHDC10Q6PID8 442 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 GBP6Q6ZN66 633 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 Q6ZNB5 142 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 C11orf57Q6ZUT1 292 aaPredicted RBP8.51□□□□□ -1.05
VTI1B-206ENST00000556461 HTR3DQ70Z44 454 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 PHTF2Q8N3S3 785 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 ZNF276Q8N554 614 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 DCLK2Q8N568 766 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 RPLP0P6Q8NHW5 317 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 KCTD13Q8WZ19 329 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 EDEM1Q92611 657 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 LRRC4Q9HBW1 653 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms