RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 HCFC1R1Q9NWW0 138 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 CGGBP1Q9UFW8 167 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-239ENST00000556315 GPR160Q9UJ42 338 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 BAZ2BQ9UIF8 2168 aaKnown RBP5.33□□□□□ -1.56
ATXN3-239ENST00000556315 CCDC196A0A1B0GTZ2 297 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 K7ESF4 209 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 ZNF197O14709 1029 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 SLC27A2O14975 620 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 ZNF263O14978 683 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 ADAM12O43184 909 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 ZBTB43O43298 467 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 EDIL3O43854 480 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 TSPAN1O60635 241 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 ERLIN2O94905 339 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 IGHDP01880 384 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 RHOP08100 348 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 PSMC3P17980 439 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 GDI1P31150 447 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 OR1D2P34982 312 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 NOP2P46087 812 aaKnown RBP5.33□□□□□ -1.56
ATXN3-239ENST00000556315 PTENP60484 403 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 POU4F1Q01851 419 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 POU5F1BQ06416 359 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 GRIK3Q13003 919 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 SRSF5Q13243 272 aaKnown RBP5.33□□□□□ -1.56
ATXN3-239ENST00000556315 SF3A2Q15428 464 aaKnown RBP5.33□□□□□ -1.56
ATXN3-239ENST00000556315 Q4G0T1 1027 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 FAM78AQ5JUQ0 283 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 DGKKQ5KSL6 1271 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 TTC22Q5TAA0 569 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 APOA5Q6Q788 366 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 B3GNT9Q6UX72 402 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 RNF111Q6ZNA4 994 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 OTUD6AQ7L8S5 288 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 CACNA2D4Q7Z3S7 1137 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 NOP9Q86U38 636 aaKnown RBP5.33□□□□□ -1.56
ATXN3-239ENST00000556315 FERMT3Q86UX7 667 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 WDR5BQ86VZ2 330 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 SYNPOQ8N3V7 929 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 RNF149Q8NC42 400 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 ING5Q8WYH8 240 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 RABGGTAQ92696 567 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 TMEM143Q96AN5 459 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 MSANTD3Q96H12 275 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 CEP170P1Q96L14 293 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 KCNC2Q96PR1 638 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 APOL6Q9BWW8 343 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 LRRC2Q9BYS8 371 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 DHX33Q9H6R0 707 aaKnown RBP5.33□□□□□ -1.56
ATXN3-239ENST00000556315 C8orf33Q9H7E9 229 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-239ENST00000556315 RXFP3Q9NSD7 469 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 APEX2Q9UBZ4 518 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 CNOT6Q9ULM6 557 aaKnown RBP5.33□□□□□ -1.56
ATXN3-239ENST00000556315 EMC9Q9Y3B6 208 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 HES2Q9Y543 173 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 PCDHGA5Q9Y5G8 931 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 PIAS3Q9Y6X2 628 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 CFAP47Q6ZTR5 3102 aa5.33□□□□□ -1.56
ATXN3-239ENST00000556315 MAP1BP46821 2468 aaKnown RBP5.33□□□□□ -1.56
ATXN3-239ENST00000556315 BAHCC1Q9P281 2608 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 CYP3A7-CYP3A51PA0A087WV96 503 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 CCDC163A0A0D9SF12 145 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 A0A1B0GUA9 196 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 ARHGEF37A1IGU5 675 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 FAM221BA6H8Z2 402 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 SRRM3A6NNA2 597 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-239ENST00000556315 GOLGA8AA7E2F4 631 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 GOLGA8BA8MQT2 603 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 H0Y8X5 98 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 INO80B-WBP1J3KQ70 363 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 HRKO00198 91 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 ADAMTS3O15072 1205 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 PRPF3O43395 683 aaKnown RBP5.32□□□□□ -1.56
ATXN3-239ENST00000556315 EPN2O95208 641 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 LRG1P02750 347 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 GSPT1P15170 499 aaKnown RBP5.32□□□□□ -1.56
ATXN3-239ENST00000556315 FCARP24071 287 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 CYP3A7P24462 503 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 AKAP5P24588 427 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 CCNE1P24864 410 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 ELF1P32519 619 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 QARSP47897 775 aaKnown RBP5.32□□□□□ -1.56
ATXN3-239ENST00000556315 NOVA1P51513 510 aaKnown RBP5.32□□□□□ -1.56
ATXN3-239ENST00000556315 RCAN1P53805 252 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 NPEPPSP55786 919 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 AMPD2Q01433 879 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 EXOSC10Q01780 885 aaKnown RBP5.32□□□□□ -1.56
ATXN3-239ENST00000556315 TUSC3Q13454 348 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 TFDP1Q14186 410 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 MXD4Q14582 209 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-239ENST00000556315 NECTIN1Q15223 517 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 SLC5A9Q2M3M2 681 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 ZNF385BQ569K4 471 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 CYP4A22Q5TCH4 519 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 DAB2IPQ5VWQ8 1189 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 CREB3L3Q68CJ9 461 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 PLA2G4FQ68DD2 849 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 CRTC3Q6UUV7 619 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 MFSD6LQ8IWD5 586 aa5.32□□□□□ -1.56
ATXN3-239ENST00000556315 ZNF513Q8N8E2 541 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms