RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PEX26Q7Z412 305 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 DAAM2Q86T65 1068 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 C1orf127Q8N9H9 656 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 LRRN4CLQ8ND94 238 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 C3orf58Q8NDZ4 430 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 SLC35G2Q8TBE7 412 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 CAPZA3Q96KX2 299 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 TMEM74Q96NL1 305 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 ACAP3Q96P50 834 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 PPP1R16BQ96T49 567 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 INSM2Q96T92 566 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-204ENST00000555890 MTG1Q9BT17 334 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-204ENST00000555890 TLR10Q9BXR5 811 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 MTMR12Q9C0I1 747 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 ADAMTS10Q9H324 1103 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 PLEKHA5Q9HAU0 1116 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 SIRPGQ9P1W8 387 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 CNTN3Q9P232 1028 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 CTTNBP2NLQ9P2B4 639 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 AMFRQ9UKV5 643 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 PPM1HQ9ULR3 514 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 CNTN6Q9UQ52 1028 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 NUB1Q9Y5A7 615 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 SPG11Q96JI7 2443 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 TANC1Q9C0D5 1861 aa7.21□□□□□ -1.25
SLIRP-204ENST00000555890 MYO10Q9HD67 2058 aa7.21□□□□□ -1.25
SLIRP-204ENST00000555890 PTPRQQ9UMZ3 2332 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 TRIP11Q15643 1979 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 LACTBL1A8MY62 500 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 M0QZ92 97 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 TM4SF5O14894 197 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 ST8SIA5O15466 376 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 FOXD2O60548 495 aaPredicted RBP7.21□□□□□ -1.26
SLIRP-204ENST00000555890 LRP3O75074 770 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 ERLIN1O75477 346 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 BAIAP3O94812 1187 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 KIF4AO95239 1232 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 GJB5O95377 273 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 CST3P01034 146 aaPredicted RBP7.21□□□□□ -1.26
SLIRP-204ENST00000555890 KRT19P08727 400 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 CXCL8P10145 99 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 MYBL1P10243 752 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 DARSP14868 501 aaKnown RBP7.21□□□□□ -1.26
SLIRP-204ENST00000555890 ACO1P21399 889 aaKnown RBP7.21□□□□□ -1.26
SLIRP-204ENST00000555890 CES1P23141 567 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 YARSP54577 528 aaKnown RBP7.21□□□□□ -1.26
SLIRP-204ENST00000555890 RBP5P82980 135 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 PURAQ00577 322 aaKnown RBP7.21□□□□□ -1.26
SLIRP-204ENST00000555890 BRD3Q15059 726 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 CLEC16AQ2KHT3 1053 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 ZNF667Q5HYK9 610 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 LIN9Q5TKA1 542 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 SPOPLQ6IQ16 392 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 TAF2Q6P1X5 1199 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 NOTUMQ6P988 496 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 SLC27A1Q6PCB7 646 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 TMEM270Q6UE05 265 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 LRRC69Q6ZNQ3 347 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 SLFN11Q7Z7L1 901 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 RSPH3Q86UC2 560 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 CDR2LQ86X02 465 aaPredicted RBP7.21□□□□□ -1.26
SLIRP-204ENST00000555890 CREG2Q8IUH2 290 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 TTC39CQ8N584 583 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 LRRC57Q8N9N7 239 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 RBBP8NLQ8NC74 664 aaPredicted RBP7.21□□□□□ -1.26
SLIRP-204ENST00000555890 MSANTD4Q8NCY6 345 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 OLIG1Q8TAK6 271 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 PPP1R13LQ8WUF5 828 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 DNAJB3Q8WWF6 145 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 CPB2Q96IY4 423 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 TSPAN18Q96SJ8 248 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 MMS19Q96T76 1030 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 PCDHB18PQ96TA0 734 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 RAD9AQ99638 391 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 THAP2Q9H0W7 228 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 FAM124BQ9H5Z6 455 aaPredicted RBP7.21□□□□□ -1.26
SLIRP-204ENST00000555890 ANKMY1Q9P2S6 941 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 UVRAGQ9P2Y5 699 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 ITGA11Q9UKX5 1188 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 GINS2Q9Y248 185 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 DERAQ9Y315 318 aa7.21□□□□□ -1.26
SLIRP-204ENST00000555890 MRPL42Q9Y6G3 142 aaKnown RBP7.21□□□□□ -1.26
SLIRP-204ENST00000555890 MIF4GDA9UHW6 222 aaKnown RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 PYCARD-AS1I3L0S3 204 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 ZNF185O15231 689 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 SPINT1O43278 529 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 THAP12O43422 761 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 MED7O43513 233 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 TBC1D4O60343 1298 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 GDF9O60383 454 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 TBX10O75333 385 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 GPR32O75388 356 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 CSDE1O75534 798 aaKnown RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 MTA2O94776 668 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 NPTXRO95502 500 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 CYP1A2P05177 515 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 EDN3P14138 238 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 H2AFXP16104 143 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 GBP2P32456 591 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 NSFP46459 744 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms