RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 NR1H3Q13133 447 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 EXOC3L4Q17RC7 722 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 MIIPQ5JXC2 388 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 PM20D1Q6GTS8 502 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 KLHDC10Q6PID8 442 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 RHBDF2Q6PJF5 856 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 FAM114A1Q8IWE2 563 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 NELL1Q92832 810 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 CD101Q93033 1021 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 SIX2Q9NPC8 291 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 CLIC5Q9NZA1 410 aa21.55■■□□□ 1.04
VTI1B-205ENST00000555543 AJAP1Q9UKB5 411 aaPredicted RBP21.55■■□□□ 1.04
VTI1B-205ENST00000555543 PRR23AA6NEV1 266 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 KRT5P13647 590 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 PON1P27169 355 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 HOXC13P31276 330 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 CCR3P51677 355 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 CNGA2Q16280 664 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 SYNPOQ8N3V7 929 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 ZNF276Q8N554 614 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 SECISBP2LQ93073 1101 aaKnown RBP21.54■■□□□ 1.04
VTI1B-205ENST00000555543 TUBGCP2Q9BSJ2 902 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 ACP6Q9NPH0 428 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 TBC1D14Q9P2M4 693 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 APEX2Q9UBZ4 518 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 DNMT3LQ9UJW3 386 aa21.54■■□□□ 1.04
VTI1B-205ENST00000555543 BECN2A8MW95 431 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 KCNJ18B7U540 433 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 GFRA3O60609 400 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 RNF40O75150 1001 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 RALAP11233 206 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 DRD1P21728 446 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 CXCL12P48061 93 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 RGS7P49802 495 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 MFAP3P55082 362 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 YWHAGP61981 247 aaKnown RBP eCLIP21.53■■□□□ 1.04
VTI1B-205ENST00000555543 MESP2Q0VG99 397 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 KCNJ12Q14500 433 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 STILQ15468 1287 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 CT47A1Q5JQC4 288 aaPredicted RBP21.53■■□□□ 1.04
VTI1B-205ENST00000555543 LY6G5CQ5SRR4 150 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 PMF1Q6P1K2 205 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 C11orf57Q6ZUT1 292 aaPredicted RBP21.53■■□□□ 1.04
VTI1B-205ENST00000555543 HTR3DQ70Z44 454 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 C12orf40Q86WS4 652 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 MIB1Q86YT6 1006 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 SLC35F5Q8WV83 523 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 KCTD13Q8WZ19 329 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 NKD2Q969F2 451 aaPredicted RBP21.53■■□□□ 1.04
VTI1B-205ENST00000555543 OTUB2Q96DC9 234 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 NDST4Q9H3R1 872 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 LRRC4Q9HBW1 653 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 NFE2L3Q9Y4A8 694 aa21.53■■□□□ 1.04
VTI1B-205ENST00000555543 KIAA1549LQ6ZVL6 1849 aa21.52■■□□□ 1.04
VTI1B-205ENST00000555543 MYOFQ9NZM1 2061 aa21.52■■□□□ 1.04
VTI1B-205ENST00000555543 ANTXRLA6NF34 631 aa21.52■■□□□ 1.04
VTI1B-205ENST00000555543 PIK3R2O00459 728 aa21.52■■□□□ 1.04
VTI1B-205ENST00000555543 MBD3O95983 291 aa21.52■■□□□ 1.04
VTI1B-205ENST00000555543 ADH5P11766 374 aa21.52■■□□□ 1.04
VTI1B-205ENST00000555543 PRKCSHP14314 528 aaPredicted RBP21.52■■□□□ 1.04
VTI1B-205ENST00000555543 EFEMP1Q12805 493 aa21.52■■□□□ 1.04
VTI1B-205ENST00000555543 ARHGAP44Q17R89 818 aa21.52■■□□□ 1.04
VTI1B-205ENST00000555543 VWA3BQ502W6 1294 aa21.52■■□□□ 1.04
VTI1B-205ENST00000555543 ZC3H14Q6PJT7 736 aaKnown RBP21.52■■□□□ 1.04
VTI1B-205ENST00000555543 ENOSF1Q7L5Y1 443 aa21.52■■□□□ 1.04
VTI1B-205ENST00000555543 ARHGAP18Q8N392 663 aa21.52■■□□□ 1.04
VTI1B-205ENST00000555543 RASAL2Q9UJF2 1139 aa21.52■■□□□ 1.04
VTI1B-205ENST00000555543 YJEFN3A6XGL0 299 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 E7ENQ6 273 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 K7ESF4 209 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 STC2O76061 302 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 PAPSS2O95340 614 aaPredicted RBP21.51■■□□□ 1.03
VTI1B-205ENST00000555543 ADH1CP00326 375 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 LCP1P13796 627 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 SLC6A11P48066 632 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 DMWDQ09019 674 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 TCP11X2Q5H9J9 407 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 DPY19L2P1Q6NXN4 242 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 Q6ZNB5 142 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 TADA2BQ86TJ2 420 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 SFTPA1Q8IWL2 248 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 SIX6OS1Q8N1H7 587 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 ZBTB44Q8NCP5 570 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 ENOX1Q8TC92 643 aaKnown RBP21.51■■□□□ 1.03
VTI1B-205ENST00000555543 SHC3Q92529 594 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 POLR3BQ9NW08 1133 aaPredicted RBP21.51■■□□□ 1.03
VTI1B-205ENST00000555543 ZSCAN32Q9NX65 697 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 PCDHGA2Q9Y5H1 932 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 ATG2BQ96BY7 2078 aa21.51■■□□□ 1.03
VTI1B-205ENST00000555543 RIF1Q5UIP0 2472 aaKnown RBP21.5■■□□□ 1.03
VTI1B-205ENST00000555543 LETM1O95202 739 aaPredicted RBP21.5■■□□□ 1.03
VTI1B-205ENST00000555543 DAOAP59103 153 aa21.5■■□□□ 1.03
VTI1B-205ENST00000555543 GOLGA8FQ08AF8 430 aa21.5■■□□□ 1.03
VTI1B-205ENST00000555543 GOLGA8DPQ0D2H9 430 aa21.5■■□□□ 1.03
VTI1B-205ENST00000555543 CCDC183Q5T5S1 534 aa21.5■■□□□ 1.03
VTI1B-205ENST00000555543 DENND1BQ6P3S1 775 aa21.5■■□□□ 1.03
VTI1B-205ENST00000555543 TMEM25Q86YD3 366 aa21.5■■□□□ 1.03
VTI1B-205ENST00000555543 SCML4Q8N228 414 aa21.5■■□□□ 1.03
VTI1B-205ENST00000555543 CLEC4CQ8WTT0 213 aa21.5■■□□□ 1.03
VTI1B-205ENST00000555543 EXOC4Q96A65 974 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms