RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 TJAP1Q5JTD0 557 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 STXBP5Q5T5C0 1151 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 DENND1BQ6P3S1 775 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 RTL10Q7L3V2 364 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 TMC8Q8IU68 726 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 NUP93Q8N1F7 819 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 TDRD5Q8NAT2 981 aaKnown RBP10.37□□□□□ -0.75
PSEN1-213ENST00000555386 SHKBP1Q8TBC3 707 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 ADAMTS19Q8TE59 1207 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 C8orf48Q96LL4 319 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 GCNAQ96QF7 691 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 RHOXF2Q9BQY4 288 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 STK33Q9BYT3 514 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 GPR88Q9GZN0 384 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 CHORDC1Q9UHD1 332 aaPredicted RBP10.37□□□□□ -0.75
PSEN1-213ENST00000555386 TFR2Q9UP52 801 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 DUSP10Q9Y6W6 482 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 TTC28Q96AY4 2481 aa10.37□□□□□ -0.75
PSEN1-213ENST00000555386 ZNF197O14709 1029 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 LCP1P13796 627 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 YWHAQP27348 245 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 BCAT1P54687 386 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 GFPT1Q06210 699 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 TAF10Q12962 218 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 IFI16Q16666 785 aaKnown RBP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 GPR158Q5T848 1215 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 ARHGAP17Q68EM7 881 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 LCLAT1Q6UWP7 414 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 GAREM2Q75VX8 874 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 CREG2Q8IUH2 290 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 FAM71AQ8IYT1 594 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 ANKRD52Q8NB46 1076 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 ZNF606Q8WXB4 792 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 FGF13Q92913 245 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 FBXO32Q969P5 355 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 ACSF2Q96CM8 615 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 SPATA17Q96L03 361 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 LRRC3Q9BY71 257 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 ZMYND15Q9H091 742 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 FAM124BQ9H5Z6 455 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 ST7Q9NRC1 585 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 SEPT11Q9NVA2 429 aaKnown RBP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 LIMD1Q9UGP4 676 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 KIAA1257Q9ULG3 409 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 NR2E1Q9Y466 385 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 CAPN6Q9Y6Q1 641 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 CES2O00748 559 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 MED7O43513 233 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 SRGAP2O75044 1071 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 MOCS3O95396 460 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 ASGR2P07307 311 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 RFX1P22670 979 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 OAS2P29728 719 aaKnown RBP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 CDC25CP30307 473 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 SOX5P35711 763 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 STAT1P42224 750 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 PAFAH1B1P43034 410 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 PDE6CP51160 858 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 ZP2Q05996 745 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 BST2Q10589 180 aaKnown RBP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 CNGA2Q16280 664 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 GLE1Q53GS7 698 aaKnown RBP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 ARHGAP15Q53QZ3 475 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 PRSS36Q5K4E3 855 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 TXNDC8Q6A555 127 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 OTOP3Q7RTS5 596 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 PIGZQ86VD9 579 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 VPS36Q86VN1 386 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 ADHFE1Q8IWW8 467 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 NPAS3Q8IXF0 933 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 MAB21L3Q8N8X9 362 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 SLC20A1Q8WUM9 679 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 RSAD2Q8WXG1 361 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 NDRG1Q92597 394 aaKnown RBP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 ZSWIM3Q96MP5 696 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 OSBPL9Q96SU4 736 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 UHRF1Q96T88 793 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 SMG9Q9H0W8 520 aaKnown RBP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 IL21Q9HBE4 155 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 LRRC4Q9HBW1 653 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 GMIPQ9P107 970 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 UXTQ9UBK9 157 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-213ENST00000555386 INTUQ9ULD6 942 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 CNTN6Q9UQ52 1028 aa10.36□□□□□ -0.75
PSEN1-213ENST00000555386 GRID2IPA4D2P6 1211 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 HHLA1C9JL84 531 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 TNFRSF10BO14763 440 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 MOSPD3O75425 235 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 RTN3O95197 1032 aaPredicted RBP10.35□□□□□ -0.75
PSEN1-213ENST00000555386 POU2F2P09086 479 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 USP17L7P0C7H9 530 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 CYP11B1P15538 503 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 TKTL1P51854 596 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 JAM2P57087 298 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 BPIFB4P59827 614 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 ADIGQ0VDE8 80 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 CASP8Q14790 479 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 PMF1Q6P1K2 205 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 POTEHQ6S545 545 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms