RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 CTC1Q2NKJ3 1217 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 ATP11CQ8NB49 1132 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 ACTL9Q8TC94 416 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 ZNF398Q8TD17 642 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 STK32AQ8WU08 396 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 PYROXD1Q8WU10 500 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 KIF12Q96FN5 646 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 ZMAT2Q96NC0 199 aaKnown RBP24.7■■□□□ 1.54
STRN3-207ENST00000555358 PAFAH2Q99487 392 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 APOL6Q9BWW8 343 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 ZNF518BQ9C0D4 1074 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 ACSS3Q9H6R3 686 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 TLE6Q9H808 572 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 NPHS2Q9NP85 383 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 E7ESA3 106 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 CDC25CP30307 473 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 PHBP35232 272 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 CDH8P55286 799 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 NKX3-2P78367 333 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 OTUD4Q01804 1114 aaKnown RBP24.69■■□□□ 1.54
STRN3-207ENST00000555358 SLC25A11Q02978 314 aaKnown RBP24.69■■□□□ 1.54
STRN3-207ENST00000555358 CYP4A22Q5TCH4 519 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 NME8Q8N427 588 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 ZFP69BQ9UJL9 534 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 SCN1AP35498 2009 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 PIAS1O75925 651 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 TPBGLP0DKB5 382 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 ARL4CP56559 192 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 PCBP1Q15365 356 aaKnown RBP eCLIP24.69■■□□□ 1.541e-6■□□□□ 11.1
STRN3-207ENST00000555358 ZNF667Q5HYK9 610 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 TAF2Q6P1X5 1199 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 TFAP2BQ92481 460 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 TRIM6Q9C030 488 aaPredicted RBP24.69■■□□□ 1.54
STRN3-207ENST00000555358 SDCBP2Q9H190 292 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 DPP3Q9NY33 737 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 LNPEPQ9UIQ6 1025 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 EFR3BQ9Y2G0 817 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 C2CD2Q9Y426 696 aa24.69■■□□□ 1.54
STRN3-207ENST00000555358 E7ENQ6 273 aa24.68■■□□□ 1.54
STRN3-207ENST00000555358 AKAP5P24588 427 aa24.68■■□□□ 1.54
STRN3-207ENST00000555358 RASSF2P50749 326 aa24.68■■□□□ 1.54
STRN3-207ENST00000555358 DYNLT1P63172 113 aa24.68■■□□□ 1.54
STRN3-207ENST00000555358 ARFGAP1Q8N6T3 406 aa24.68■■□□□ 1.54
STRN3-207ENST00000555358 ENDOVQ8N8Q3 282 aaKnown RBP24.68■■□□□ 1.54
STRN3-207ENST00000555358 BANPQ8N9N5 519 aa24.68■■□□□ 1.54
STRN3-207ENST00000555358 KLHDC9Q8NEP7 349 aa24.68■■□□□ 1.54
STRN3-207ENST00000555358 DCAKDQ8WVC6 231 aa24.68■■□□□ 1.54
STRN3-207ENST00000555358 CFHR5Q9BXR6 569 aa24.68■■□□□ 1.54
STRN3-207ENST00000555358 PCDHGC3Q9UN70 934 aa24.68■■□□□ 1.54
STRN3-207ENST00000555358 THSD7BQ9C0I4 1608 aa24.68■■□□□ 1.54
STRN3-207ENST00000555358 ABL2P42684 1182 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 VEGFBP49765 207 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 GLRA4Q5JXX5 417 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 FYB2Q5VWT5 728 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 C3orf62Q6ZUJ4 267 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 CLNKQ7Z7G1 428 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 MTDHQ86UE4 582 aaKnown RBP24.67■■□□□ 1.54
STRN3-207ENST00000555358 FBXO36Q8NEA4 188 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 TCP10LQ8TDR4 215 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 SNX27Q96L92 541 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 SMYD3Q9H7B4 428 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 SAR1AQ9NR31 198 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 SMNDC1O75940 238 aaKnown RBP eCLIP24.67■■□□□ 1.54
STRN3-207ENST00000555358 RECQL4O94761 1208 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 IL1R2P27930 398 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 PTPN4P29074 926 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 RPL22P35268 128 aaKnown RBP24.67■■□□□ 1.54
STRN3-207ENST00000555358 TAF11Q15544 211 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 TAZQ16635 292 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 KLHL38Q2WGJ6 581 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 WASHC2DQ5SRD0 308 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 UBXN11Q5T124 520 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 CCSAPQ6IQ19 270 aaPredicted RBP24.67■■□□□ 1.54
STRN3-207ENST00000555358 BBS12Q6ZW61 710 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 BCO2Q9BYV7 579 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 C12orf65Q9H3J6 166 aaKnown RBP24.67■■□□□ 1.54
STRN3-207ENST00000555358 LRRC42Q9Y546 428 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 CDY2AQ9Y6F7 541 aa24.67■■□□□ 1.54
STRN3-207ENST00000555358 TCRBV7S3A2A0A539 114 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 LIN7AO14910 233 aaPredicted RBP24.66■■□□□ 1.54
STRN3-207ENST00000555358 TM9SF1O15321 606 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 TMEM63AO94886 807 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 CTSHP09668 335 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 AXLP30530 894 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 RFC1P35251 1148 aaPredicted RBP24.66■■□□□ 1.54
STRN3-207ENST00000555358 MRPS6P82932 125 aaKnown RBP24.66■■□□□ 1.54
STRN3-207ENST00000555358 SMTNL2Q2TAL5 461 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 RFWD2Q8NHY2 731 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 NAF1Q96HR8 494 aaKnown RBP24.66■■□□□ 1.54
STRN3-207ENST00000555358 HPDLQ96IR7 371 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 RNF39Q9H2S5 420 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 SLC17A7Q9P2U7 560 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 WDR91A4D1P6 747 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 CST8O60676 142 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 LRCH4O75427 683 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 HMGCRP04035 888 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 ORC1Q13415 861 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 BLMHQ13867 455 aa24.66■■□□□ 1.54
STRN3-207ENST00000555358 APBB1IPQ7Z5R6 666 aaPredicted RBP24.66■■□□□ 1.54
STRN3-207ENST00000555358 NUDCD1Q96RS6 583 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms