RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 B4GALT5O43286 388 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 EXTL3O43909 919 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 MOSPD3O75425 235 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 TDP2O95551 362 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 CAVIN2O95810 425 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 HMGB1P09429 215 aaKnown RBP5.29□□□□□ -1.56
ATXN3-229ENST00000554672 RPL10P27635 214 aaKnown RBP5.29□□□□□ -1.56
ATXN3-229ENST00000554672 CCR2P41597 374 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 EPHA5P54756 1037 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 NLRP5P59047 1200 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 ROR1Q01973 937 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 CLCQ05315 142 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 FCHO2Q0JRZ9 810 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 PTPAQ15257 358 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 NAB2Q15742 525 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 PLK5Q496M5 336 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 SOWAHCQ53LP3 525 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-229ENST00000554672 CDCP2Q5VXM1 449 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 TPGS2Q68CL5 300 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 OVOS1Q6IE37 1185 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 ZPBP2Q6X784 338 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 Q6ZS52 159 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 HAUS6Q7Z4H7 955 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 CDR2LQ86X02 465 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-229ENST00000554672 ZCCHC14Q8WYQ9 949 aaKnown RBP5.29□□□□□ -1.56
ATXN3-229ENST00000554672 UROC1Q96N76 676 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 EDEM2Q9BV94 578 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 SGPP1Q9BX95 441 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 GZF1Q9H116 711 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-229ENST00000554672 SMOC1Q9H4F8 434 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 CYP4F11Q9HBI6 524 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 XPNPEP1Q9NQW7 623 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 C2orf42Q9NWW7 574 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 SNTG2Q9NY99 539 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 GMIPQ9P107 970 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 WRAP73Q9P2S5 460 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-229ENST00000554672 DDX25Q9UHL0 483 aaKnown RBP5.29□□□□□ -1.56
ATXN3-229ENST00000554672 GPR160Q9UJ42 338 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 SLC8A2Q9UPR5 921 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 MSRB2Q9Y3D2 182 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 NEUROG3Q9Y4Z2 214 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 LAMA4Q16363 1823 aa5.29□□□□□ -1.56
ATXN3-229ENST00000554672 FRYLO94915 3013 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 BCLAF3A2AJT9 711 aaKnown RBP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 SLC38A8A6NNN8 435 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 SYN3O14994 580 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 N4BP3O15049 544 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 MARCH6O60337 910 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 SLITRK3O94933 977 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 SEC24AO95486 1093 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 TOP3BO95985 862 aaKnown RBP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 MYL4P12829 197 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 XRCC6P12956 609 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 GLRA2P23416 452 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 IGFBP6P24592 240 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 TKTP29401 623 aaKnown RBP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 HOXC13P31276 330 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 RDXP35241 583 aaKnown RBP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 SOX9P48436 509 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 PXNP49023 591 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 CLCNKBP51801 687 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 ARPP19P56211 112 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 AMPD2Q01433 879 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 CREB5Q02930 508 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 GRSF1Q12849 480 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 DUSP4Q13115 394 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 CAPSQ13938 189 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 MRPL58Q14197 206 aaKnown RBP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 KRT32Q14532 448 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 PON2Q15165 354 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 TEAD2Q15562 447 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 ELF2Q15723 593 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 UPP1Q16831 310 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 FAM187BQ17R55 369 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 BBS9Q3SYG4 887 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 ARHGAP29Q52LW3 1261 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 PPP4R3AQ6IN85 833 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 TCEAL6Q6IPX3 200 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 GALNT17Q6IS24 598 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 CD300LGQ6UXG3 332 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 RNF111Q6ZNA4 994 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 C11orf74Q86VG3 221 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 TPH2Q8IWU9 490 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 TCEAL3Q969E4 200 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 TCEANC2Q96MN5 208 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 TMEM209Q96SK2 561 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 LXNQ9BS40 222 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 SLC26A6Q9BXS9 759 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 RNF26Q9BY78 433 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 FZD8Q9H461 694 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 SLC32A1Q9H598 525 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 SLITRK6Q9H5Y7 841 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 KCNMB3Q9NPA1 279 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 TMEM9BQ9NQ34 198 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 ASAH2Q9NR71 780 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 ANKEF1Q9NU02 776 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 PRMT7Q9NVM4 692 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 OBP2AQ9NY56 170 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 UBP1Q9NZI7 540 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms