RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SHC4Q6S5L8 630 aa4.8□□□□□ -1.64
SCFD1-210ENST00000553693 CHST15Q7LFX5 561 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-210ENST00000553693 C16orf71Q8IYS4 520 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-210ENST00000553693 FAM156AQ8NDB6 213 aa4.8□□□□□ -1.64
SCFD1-210ENST00000553693 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-210ENST00000553693 COQ8BQ96D53 544 aa4.8□□□□□ -1.64
SCFD1-210ENST00000553693 HIC2Q96JB3 615 aa4.8□□□□□ -1.64
SCFD1-210ENST00000553693 VPS50Q96JG6 964 aa4.8□□□□□ -1.64
SCFD1-210ENST00000553693 ZC3H10Q96K80 434 aaKnown RBP4.8□□□□□ -1.64
SCFD1-210ENST00000553693 MSLNLQ96KJ4 702 aa4.8□□□□□ -1.64
SCFD1-210ENST00000553693 KRTAP1-5Q9BYS1 174 aa4.8□□□□□ -1.64
SCFD1-210ENST00000553693 CHST8Q9H2A9 424 aa4.8□□□□□ -1.64
SCFD1-210ENST00000553693 DNAJB11Q9UBS4 358 aa4.8□□□□□ -1.64
SCFD1-210ENST00000553693 ITGB1BP2Q9UKP3 347 aa4.8□□□□□ -1.64
SCFD1-210ENST00000553693 RIMKLBQ9ULI2 386 aa4.8□□□□□ -1.64
SCFD1-210ENST00000553693 VSTM5A8MXK1 200 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 ADRA1DP25100 572 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 NR4A2P43354 598 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 CARSP49589 748 aaKnown RBP4.79□□□□□ -1.64
SCFD1-210ENST00000553693 TXNL4AP83876 142 aaKnown RBP4.79□□□□□ -1.64
SCFD1-210ENST00000553693 GBX1Q14549 363 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 CLCA4Q14CN2 919 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 GFOD2Q3B7J2 385 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 TMTC4Q5T4D3 741 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 LIX1LQ8IVB5 337 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 MYO1HQ8N1T3 1032 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 SDR16C5Q8N3Y7 309 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 PNPLA1Q8N8W4 532 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 C16orf52Q8NHV5 167 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 MAP4K1Q92918 833 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 ZDHHC12Q96GR4 267 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 HIST1H2AAQ96QV6 131 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 DKK4Q9UBT3 224 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 ZNF212Q9UDV6 495 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 DDX20Q9UHI6 824 aaKnown RBP4.79□□□□□ -1.64
SCFD1-210ENST00000553693 AFG3L2Q9Y4W6 797 aa4.79□□□□□ -1.64
SCFD1-210ENST00000553693 IKBKBO14920 756 aa4.78□□□□□ -1.64
SCFD1-210ENST00000553693 KCNAB3O43448 404 aa4.78□□□□□ -1.64
SCFD1-210ENST00000553693 TMEM191BP0C7N4 346 aa4.78□□□□□ -1.64
SCFD1-210ENST00000553693 POLGP54098 1239 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-210ENST00000553693 AWAT1Q58HT5 328 aa4.78□□□□□ -1.64
SCFD1-210ENST00000553693 PLAG1Q6DJT9 500 aa4.78□□□□□ -1.64
SCFD1-210ENST00000553693 RANBP10Q6VN20 620 aa4.78□□□□□ -1.64
SCFD1-210ENST00000553693 UNC13DQ70J99 1090 aa4.78□□□□□ -1.64
SCFD1-210ENST00000553693 TECPR1Q7Z6L1 1165 aa4.78□□□□□ -1.64
SCFD1-210ENST00000553693 SESTD1Q86VW0 696 aa4.78□□□□□ -1.64
SCFD1-210ENST00000553693 C12orf76Q8N812 135 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-210ENST00000553693 BTBD1Q9H0C5 482 aa4.78□□□□□ -1.64
SCFD1-210ENST00000553693 PRDM11Q9NQV5 511 aa4.78□□□□□ -1.64
SCFD1-210ENST00000553693 MYMKA6NI61 221 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 FOXN3O00409 490 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-210ENST00000553693 MCM5P33992 734 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 EIF4A1P60842 406 aaKnown RBP4.77□□□□□ -1.65
SCFD1-210ENST00000553693 GRM3Q14832 879 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 MFSD13AQ14CX5 517 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 TWIST1Q15672 202 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 C10orf25Q5T742 122 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 AWAT2Q6E213 333 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 DEF8Q6ZN54 512 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 USP49Q70CQ1 688 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 METTL25Q8N6Q8 603 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 EDC3Q96F86 508 aaKnown RBP4.77□□□□□ -1.65
SCFD1-210ENST00000553693 SIGLEC11Q96RL6 698 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 STRBPQ96SI9 672 aaKnown RBP4.77□□□□□ -1.65
SCFD1-210ENST00000553693 CINPQ9BW66 212 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-210ENST00000553693 BRIP1Q9BX63 1249 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 MTMR4Q9NYA4 1195 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 VPS51Q9UID3 782 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 CAPN11Q9UMQ6 739 aa4.77□□□□□ -1.65
SCFD1-210ENST00000553693 FRMPD2Q68DX3 1309 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-210ENST00000553693 AGPSO00116 658 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 CLIC1O00299 241 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 ADAM10O14672 748 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 RHCEP18577 417 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 BTF3P20290 206 aaKnown RBP4.76□□□□□ -1.65
SCFD1-210ENST00000553693 TACR3P29371 465 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 RPS13P62277 151 aaKnown RBP4.76□□□□□ -1.65
SCFD1-210ENST00000553693 HSF1Q00613 529 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 RHDQ02161 417 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 ID2Q02363 134 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 ZNF91Q05481 1191 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 RBMS2Q15434 407 aaKnown RBP4.76□□□□□ -1.65
SCFD1-210ENST00000553693 ZNF260Q3ZCT1 412 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 KRTAP5-1Q6L8H4 278 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 CLEC9AQ6UXN8 241 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 C11orf44Q8N8P7 122 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 FAM71DQ8N9W8 422 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 MBD3L2Q8NHZ7 208 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-210ENST00000553693 SNX22Q96L94 193 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 USP29Q9HBJ7 922 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 HPSEQ9Y251 543 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 SLC27A6Q9Y2P4 619 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 ZMYM2Q9UBW7 1377 aa4.76□□□□□ -1.65
SCFD1-210ENST00000553693 MT-ND5P03915 603 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 ANXA2P07355 339 aaKnown RBP4.75□□□□□ -1.65
SCFD1-210ENST00000553693 TMEM225BP0DP42 221 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 NTSR1P30989 418 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 THBS4P35443 961 aa4.75□□□□□ -1.65
SCFD1-210ENST00000553693 COPAP53621 1224 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms