RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 LOC100996750A0A140TA64 210 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 TAF4O00268 1085 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 OGTO15294 1046 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 HYAL3O43820 417 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-219ENST00000553488 CAPNS1P04632 268 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 FURINP09958 794 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 HNRNPLP14866 589 aaKnown RBP eCLIP7.84□□□□□ -1.15
ATXN3-219ENST00000553488 PAX3P23760 479 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 ITGB7P26010 798 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 CDC25AP30304 524 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 GBP1P32455 592 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 GPR15P49685 360 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 TOB1P50616 345 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-219ENST00000553488 DGKEP52429 567 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 SLC12A3P55017 1021 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 NRG1Q02297 640 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-219ENST00000553488 FAM160A1Q05DH4 1040 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 EHHADHQ08426 723 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 PDE4CQ08493 712 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 RAD51AP2Q09MP3 1159 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 SMARCB1Q12824 385 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 BFSP1Q12934 665 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 SAFBQ15424 915 aaKnown RBP eCLIP7.84□□□□□ -1.15
ATXN3-219ENST00000553488 GAB4Q2WGN9 574 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 NKAPLQ5M9Q1 402 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 HYIQ5T013 277 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 KIAA1211LQ6NV74 962 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 IGF2-ASQ6U949 168 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 LRSAM1Q6UWE0 723 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 C11orf74Q86VG3 221 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 MON1AQ86VX9 555 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 CPA6Q8N4T0 437 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 MDGA1Q8NFP4 955 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 TSTD1Q8NFU3 115 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 OLIG1Q8TAK6 271 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 USP33Q8TEY7 942 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 OSCP1Q8WVF1 389 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 CD101Q93033 1021 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 PMEPA1Q969W9 287 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 C8orf76Q96K31 380 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 SPACA7Q96KW9 195 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 CNOT6LQ96LI5 555 aaKnown RBP7.84□□□□□ -1.15
ATXN3-219ENST00000553488 SLC22A12Q96S37 553 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 TSPAN18Q96SJ8 248 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 KRTAP4-6Q9BYQ5 205 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 ADAM19Q9H013 955 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 TPSG1Q9NRR2 321 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 TMLHEQ9NVH6 421 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 CPSF3Q9UKF6 684 aaKnown RBP7.84□□□□□ -1.15
ATXN3-219ENST00000553488 KLK13Q9UKR3 277 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 INVSQ9Y283 1065 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 PCDHB6Q9Y5E3 794 aa7.84□□□□□ -1.15
ATXN3-219ENST00000553488 GOLGA4Q13439 2230 aaKnown RBP7.83□□□□□ -1.16
ATXN3-219ENST00000553488 ASXL3Q9C0F0 2248 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 KNL1Q8NG31 2342 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 A0A0B4J269 797 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 K7EQS6 105 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 HNRNPDLO14979 420 aaKnown RBP7.83□□□□□ -1.16
ATXN3-219ENST00000553488 NOL4O94818 638 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 TCF3P15923 654 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 OPRD1P41143 372 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 PRPHP41219 470 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 IRX4P78413 519 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 AMPD2Q01433 879 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 DOC2BQ14184 412 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 TMEM132DQ14C87 1099 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 KYAT1Q16773 422 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 PEAR1Q5VY43 1037 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-219ENST00000553488 KRT79Q5XKE5 535 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 WSCD1Q658N2 575 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 CEP135Q66GS9 1140 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 ANO7Q6IWH7 933 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 PIP4P1Q86T03 277 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 SYT2Q8N9I0 419 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-219ENST00000553488 FBXO18Q8NFZ0 1043 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 LRRC15Q8TF66 581 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 LEO1Q8WVC0 666 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-219ENST00000553488 ATP2A3Q93084 1043 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 TRMT2BQ96GJ1 504 aaKnown RBP7.83□□□□□ -1.16
ATXN3-219ENST00000553488 MYRFLQ96LU7 910 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 FIZ1Q96SL8 496 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 PKMYT1Q99640 499 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 RAB34Q9BZG1 259 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 TMEM206Q9H813 350 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 RPF1Q9H9Y2 349 aaKnown RBP7.83□□□□□ -1.16
ATXN3-219ENST00000553488 DSEQ9UL01 958 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 MMP17Q9ULZ9 603 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 DERAQ9Y315 318 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 MSRB2Q9Y3D2 182 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 WNT6Q9Y6F9 365 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 CABIN1Q9Y6J0 2220 aa7.83□□□□□ -1.16
ATXN3-219ENST00000553488 MAST4O15021 2626 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 NPHP3-ACAD11A0A0J9YXS1 232 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 FAM221BA6H8Z2 402 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 UPK3BL1B0FP48 263 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 UPK3BL2E5RIL1 263 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 K7ELQ4 463 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-219ENST00000553488 CYB561D2O14569 222 aa7.82□□□□□ -1.16
ATXN3-219ENST00000553488 SMNDC1O75940 238 aaKnown RBP eCLIP7.82□□□□□ -1.16
ATXN3-219ENST00000553488 CSH1P0DML2 217 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms