RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 E2F8A0AVK6 867 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 OAS1P00973 400 aaKnown RBP10.5□□□□□ -0.73
ACTN1-208ENST00000553370 PMLP29590 882 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 EIF2DP41214 584 aaKnown RBP10.5□□□□□ -0.73
ACTN1-208ENST00000553370 PIK3CAP42336 1068 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 AP3M2P53677 418 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 SLC5A3P53794 718 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 NCOA4Q13772 614 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 TRIM61Q5EBN2 209 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 LY6G5CQ5SRR4 150 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 C10orf76Q5T2E6 689 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 LYSMD4Q5XG99 296 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 GRAMD4Q6IC98 578 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 LIMS2Q7Z4I7 341 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 HSCBQ8IWL3 235 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 TMEFF1Q8IYR6 380 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 ZNF513Q8N8E2 541 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-208ENST00000553370 KIAA1958Q8N8K9 716 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 ZNF507Q8TCN5 953 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 SCFD1Q8WVM8 642 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 RLN3Q8WXF3 142 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 OVCA2Q8WZ82 227 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 OTUB2Q96DC9 234 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 C7orf25Q9BPX7 421 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 IMPG2Q9BZV3 1241 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 RNF38Q9H0F5 515 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 SLC32A1Q9H598 525 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 ZDHHC4Q9NPG8 344 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 GMIPQ9P107 970 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 DEC1Q9P2X7 70 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 ATXN2Q99700 1313 aaKnown RBP10.5□□□□□ -0.73
ACTN1-208ENST00000553370 GOLGA4Q13439 2230 aaKnown RBP10.5□□□□□ -0.73
ACTN1-208ENST00000553370 ZFYVE26Q68DK2 2539 aa10.5□□□□□ -0.73
ACTN1-208ENST00000553370 PATE3B3GLJ2 98 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 SGK1O00141 431 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 AP5Z1O43299 807 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 COCHO43405 550 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 KIF20AO95235 890 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 CST3P01034 146 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-208ENST00000553370 FAM163BP0C2L3 166 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 HOXB2P14652 356 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 CASP1P29466 404 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 HOXD13P35453 343 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 TNFRSF4P43489 277 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 CASP4P49662 377 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 CACNA2D1P54289 1103 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 RPL6Q02878 288 aaKnown RBP10.49□□□□□ -0.73
ACTN1-208ENST00000553370 KNOP1Q1ED39 458 aaKnown RBP10.49□□□□□ -0.73
ACTN1-208ENST00000553370 EPM2AIP1Q7L775 607 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-208ENST00000553370 ACOT1Q86TX2 421 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 RASSF3Q86WH2 238 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 C12orf40Q86WS4 652 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 HDDC3Q8N4P3 179 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 IL17RCQ8NAC3 791 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 CCDC150Q8NCX0 1101 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 SCAMP5Q8TAC9 235 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 CCDC47Q96A33 483 aaKnown RBP10.49□□□□□ -0.73
ACTN1-208ENST00000553370 XPO6Q96QU8 1125 aaKnown RBP10.49□□□□□ -0.73
ACTN1-208ENST00000553370 GTPBP2Q9BX10 602 aaKnown RBP10.49□□□□□ -0.73
ACTN1-208ENST00000553370 FBXO44Q9H4M3 255 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 CCSER2Q9H7U1 834 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 TLR8Q9NR97 1041 aaKnown RBP10.49□□□□□ -0.73
ACTN1-208ENST00000553370 FAM49BQ9NUQ9 324 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 DNAJC17Q9NVM6 304 aaKnown RBP10.49□□□□□ -0.73
ACTN1-208ENST00000553370 CHORDC1Q9UHD1 332 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-208ENST00000553370 FRMD4BQ9Y2L6 1034 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 CABIN1Q9Y6J0 2220 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 ACACAQ13085 2346 aa10.49□□□□□ -0.73
ACTN1-208ENST00000553370 LRRIQ3A6PVS8 624 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-208ENST00000553370 NEDD8-MDP1E9PL57 170 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 GIPC1O14908 333 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 TGFB1I1O43294 461 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 TLR5O60602 858 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 TULP3O75386 442 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 STAU1O95793 577 aaKnown RBP10.48□□□□□ -0.73
ACTN1-208ENST00000553370 OLFM2O95897 454 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 FAM200BP0CF97 657 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 CCDC130P13994 396 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 ADORA2BP29275 332 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 SOX11P35716 441 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 WASP42768 502 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 TUBP50607 506 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 CDH8P55286 799 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 MAP3K7CLP57077 242 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 SHC2P98077 582 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 ZXDBP98169 803 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 ORC1Q13415 861 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 TMCO4Q5TGY1 634 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 CEP135Q66GS9 1140 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 RHBDF2Q6PJF5 856 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 SHC4Q6S5L8 630 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 RABEPKQ7Z6M1 372 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 SYT12Q8IV01 421 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 SFTPA1Q8IWL2 248 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 BBS7Q8IWZ6 715 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 CHPFQ8IZ52 775 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 ADGRG2Q8IZP9 1017 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 DEFB124Q8NES8 71 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 SLC2A14Q8TDB8 520 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms