RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TLR5O60602 858 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 GFPT2O94808 682 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 FBXO21O94952 628 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 OLFM2O95897 454 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 PNMA6AP0CW24 399 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-225ENST00000551845 TCF3P15923 654 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 YWHAGP61981 247 aaKnown RBP eCLIP11.15□□□□□ -0.62
PTCH1-225ENST00000551845 ADIGQ0VDE8 80 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 ANGPT1Q15389 498 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 KLHDC10Q6PID8 442 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 SCD5Q86SK9 330 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 TMEM110Q86TL2 294 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 DDX42Q86XP3 938 aaKnown RBP eCLIP11.15□□□□□ -0.62
PTCH1-225ENST00000551845 ZNF677Q86XU0 584 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 FMNL3Q8IVF7 1028 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 SCUBE3Q8IX30 993 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 KIAA1958Q8N8K9 716 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 TMEM35BQ8NCS4 154 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 GOLGA1Q92805 767 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 DNASE1L2Q92874 299 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 ANP32EQ9BTT0 268 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 SLC4A5Q9BY07 1137 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 MIS12Q9H081 205 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 CCSER2Q9H7U1 834 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 NMUR1Q9HB89 426 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 ABCC13Q9NSE7 274 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.15□□□□□ -0.62
PTCH1-225ENST00000551845 SMPD4Q9NXE4 827 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 DNMT3LQ9UJW3 386 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 CPQQ9Y646 472 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 FAM186AA6NE01 2351 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 TSC2P49815 1807 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 LEFTY2O00292 366 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 PIK3R2O00459 728 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 SLC9A3R1O14745 358 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-225ENST00000551845 SART1O43290 800 aaKnown RBP11.14□□□□□ -0.63
PTCH1-225ENST00000551845 TBX18O95935 607 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 LMNAP02545 664 aaKnown RBP11.14□□□□□ -0.63
PTCH1-225ENST00000551845 GLULP15104 373 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 RPL34P49207 117 aaKnown RBP11.14□□□□□ -0.63
PTCH1-225ENST00000551845 PGFP49763 221 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 MLLT6P55198 1093 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-225ENST00000551845 JAM2P57087 298 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 COG7P83436 770 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 AMPD2Q01433 879 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 PRKCQQ04759 706 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 GOLGA8FQ08AF8 430 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 GOLGA8DPQ0D2H9 430 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 NR1H3Q13133 447 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 PUM1Q14671 1186 aaKnown RBP eCLIP11.14□□□□□ -0.63
PTCH1-225ENST00000551845 MTF1Q14872 753 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 PDGFRLQ15198 375 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 C10orf120Q5SQS8 335 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 BSPRYQ5W0U4 402 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 CWF19L1Q69YN2 538 aaKnown RBP11.14□□□□□ -0.63
PTCH1-225ENST00000551845 RSRC2Q7L4I2 434 aaKnown RBP11.14□□□□□ -0.63
PTCH1-225ENST00000551845 SIX5Q8N196 739 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 WDTC1Q8N5D0 677 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 RNF214Q8ND24 703 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 RNF139Q8WU17 664 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 OSCP1Q8WVF1 389 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 IRGQQ8WZA9 623 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 NDRG1Q92597 394 aaKnown RBP11.14□□□□□ -0.63
PTCH1-225ENST00000551845 PPP1R13BQ96KQ4 1090 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 NELL2Q99435 816 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 FAM83CQ9BQN1 747 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 EDEM3Q9BZQ6 932 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 OSER1Q9NX31 292 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 DUS2Q9NX74 493 aaKnown RBP11.14□□□□□ -0.63
PTCH1-225ENST00000551845 IFNKQ9P0W0 207 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 TBC1D14Q9P2M4 693 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 NUDT5Q9UKK9 219 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 CA14Q9ULX7 337 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 SH3BP1Q9Y3L3 701 aa11.14□□□□□ -0.63
PTCH1-225ENST00000551845 E2F8A0AVK6 867 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 YJEFN3A6XGL0 299 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 E7ENQ6 273 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 MAN2B1O00754 1011 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 CBFA2T2O43439 604 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 PI15O43692 258 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 GABBR2O75899 941 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 FERP16591 822 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 AOC1P19801 751 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 IFNAR2P48551 515 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 KPNA1P52294 538 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-225ENST00000551845 DAOAP59103 153 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 ZXDBP98169 803 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 ARID5AQ03989 594 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 RUNX3Q13761 415 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 MLF2Q15773 248 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-225ENST00000551845 ZNF77Q15935 545 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 TAF3Q5VWG9 929 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 C1orf228Q6PIY5 440 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 NOP9Q86U38 636 aaKnown RBP11.13□□□□□ -0.63
PTCH1-225ENST00000551845 PASD1Q8IV76 773 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 CCDC105Q8IYK2 499 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 ADGRG2Q8IZP9 1017 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 DTWD2Q8NBA8 298 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 ZFYVE19Q96K21 471 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 CNTNAP3BQ96NU0 1288 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms