RNA–Protein interactions for RNA: ENST00000550167.5

NTM-222, Transcript of neurotrimin, human

TSL 5

Gene NTM, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NTM-222	ENST00000550167	UBXN2B	Q14CS0	331 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	SLC18A3	Q16572	532 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	CLEC16A	Q2KHT3	1053 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	MGAT5B	Q3V5L5	792 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	SLC44A4	Q53GD3	710 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	PMF1	Q6P1K2	205 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	ITIH5	Q86UX2	942 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	PIGZ	Q86VD9	579 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	PHF13	Q86YI8	300 aa	Predicted RBP	13.08	□□□□□ -0.32
NTM-222	ENST00000550167	NPAS3	Q8IXF0	933 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	LEMD2	Q8NC56	503 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	CCDC112	Q8NEF3	446 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	NELL1	Q92832	810 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	VCPIP1	Q96JH7	1222 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	NOX5	Q96PH1	765 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	KCNK16	Q96T55	309 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	CHP1	Q99653	195 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	SEPT5	Q99719	369 aa	Predicted RBP	13.08	□□□□□ -0.32
NTM-222	ENST00000550167	KXD1	Q9BQD3	176 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	ISCU	Q9H1K1	167 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	CYTH4	Q9UIA0	394 aa		13.08	□□□□□ -0.32
NTM-222	ENST00000550167	SMG5	Q9UPR3	1016 aa	Known RBP	13.08	□□□□□ -0.32
NTM-222	ENST00000550167	SHISA7	A6NL88	538 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	FAM170B	A6NMN3	283 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	TULP2	O00295	520 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	DDX3X	O00571	662 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
NTM-222	ENST00000550167	LILRB5	O75023	590 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	LRG1	P02750	347 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	CSH1	P0DML2	217 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	CSH2	P0DML3	217 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	HMGA1	P17096	107 aa	Known RBP	13.07	□□□□□ -0.32
NTM-222	ENST00000550167	TNFAIP3	P21580	790 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	CD72	P21854	359 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	TGM1	P22735	817 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	MMP8	P22894	467 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	TARS	P26639	723 aa	Known RBP	13.07	□□□□□ -0.32
NTM-222	ENST00000550167	SCNN1A	P37088	669 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	KIF11	P52732	1056 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	SNX16	P57768	344 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	CSTF1	Q05048	431 aa	Known RBP	13.07	□□□□□ -0.32
NTM-222	ENST00000550167	TWF1	Q12792	350 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	TDRD12	Q587J7	1177 aa	Known RBP	13.07	□□□□□ -0.32
NTM-222	ENST00000550167	PPM1L	Q5SGD2	360 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	TAF3	Q5VWG9	929 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	PM20D1	Q6GTS8	502 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	POTEH	Q6S545	545 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	DENND5B	Q6ZUT9	1274 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	CCDC186	Q7Z3E2	898 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	NUP93	Q8N1F7	819 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	UBA3	Q8TBC4	463 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	OVCA2	Q8WZ82	227 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	CLDN23	Q96B33	292 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	LRRC3	Q9BY71	257 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	MIS12	Q9H081	205 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	EPC1	Q9H2F5	836 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	FBXO44	Q9H4M3	255 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.07	□□□□□ -0.32
NTM-222	ENST00000550167	CNGB3	Q9NQW8	809 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	PRMT8	Q9NR22	394 aa	Predicted RBP	13.07	□□□□□ -0.32
NTM-222	ENST00000550167	HCFC1R1	Q9NWW0	138 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167	NCDN	Q9UBB6	729 aa		13.07	□□□□□ -0.32
NTM-222	ENST00000550167		A0A087X0T9	212 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	SOBP	A7XYQ1	873 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	XYLB	O75191	536 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	RTN2	O75298	545 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	GABBR2	O75899	941 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	KRT37	O76014	449 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	FBXO21	O94952	628 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	ZDHHC11B	P0C7U3	371 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	FAM228B	P0C875	321 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	EIF4A3	P38919	411 aa	Known RBP	13.06	□□□□□ -0.32
NTM-222	ENST00000550167	MAGEA9	P43362	315 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	PPP3CC	P48454	512 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	SLC5A3	P53794	718 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	ATXN1	P54253	815 aa	Known RBP	13.06	□□□□□ -0.32
NTM-222	ENST00000550167	PFKP	Q01813	784 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	C1QBP	Q07021	282 aa	Known RBP	13.06	□□□□□ -0.32
NTM-222	ENST00000550167	PTP4A2	Q12974	167 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	FZD5	Q13467	585 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	VEPH1	Q14D04	833 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	DDR2	Q16832	855 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	PTPN20	Q4JDL3	420 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	SNX30	Q5VWJ9	437 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	ACAD10	Q6JQN1	1059 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	MON1B	Q7L1V2	547 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	TMC8	Q8IU68	726 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	ZDHHC17	Q8IUH5	632 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	SCN4B	Q8IWT1	228 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	LRRC8A	Q8IWT6	810 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	ZNF276	Q8N554	614 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	MSANTD4	Q8NCY6	345 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	C1orf131	Q8NDD1	294 aa	Known RBP	13.06	□□□□□ -0.32
NTM-222	ENST00000550167	IRGQ	Q8WZA9	623 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	PPP1R13B	Q96KQ4	1090 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	CPXM1	Q96SM3	734 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	BAG1	Q99933	345 aa	Predicted RBP	13.06	□□□□□ -0.32
NTM-222	ENST00000550167	PDCL3	Q9H2J4	239 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	ZSCAN32	Q9NX65	697 aa		13.06	□□□□□ -0.32
NTM-222	ENST00000550167	DNMT3B	Q9UBC3	853 aa	Known RBP	13.06	□□□□□ -0.32
NTM-222	ENST00000550167	UXT	Q9UBK9	157 aa	Predicted RBP	13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms