RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CHURC1-FNTBB4DL54 471 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 E7ENQ6 273 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 K7EQS6 105 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 K7ESF4 209 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 M0QYV0 167 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 XPO1O14980 1071 aaKnown RBP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 RNF40O75150 1001 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 STC2O76061 302 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 FGFR1OPO95684 399 aaKnown RBP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 HMBSP08397 361 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 PAEPP09466 180 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 CHRM1P11229 460 aaPredicted RBP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 LCP1P13796 627 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 ERCC5P28715 1186 aaPredicted RBP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 ATP5C1P36542 298 aaKnown RBP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 PLA2G4AP47712 749 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 CXCL12P48061 93 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 PXNP49023 591 aaPredicted RBP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 FNTBP49356 437 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 BCAT1P54687 386 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 YWHAGP61981 247 aaKnown RBP eCLIP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 BST2Q10589 180 aaKnown RBP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 KCNMA1Q12791 1236 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 CETN1Q12798 172 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 EFEMP1Q12805 493 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 GRSF1Q12849 480 aaKnown RBP eCLIP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 LRRC32Q14392 662 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 CNGA2Q16280 664 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 TPD52L1Q16890 204 aaPredicted RBP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 ARHGAP44Q17R89 818 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 DGKKQ5KSL6 1271 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 EMC10Q5UCC4 262 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 HEATR6Q6AI08 1181 aaKnown RBP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 PM20D1Q6GTS8 502 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 MAMSTRQ6ZN01 415 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 MIB1Q86YT6 1006 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 SPEM1Q8N4L4 309 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 NAT16Q8N8M0 369 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 SLC35F5Q8WV83 523 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 EDEM1Q92611 657 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 CD101Q93033 1021 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 NKD2Q969F2 451 aaPredicted RBP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 UBXN6Q9BZV1 441 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 IRF2BPLQ9H1B7 796 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 THAP9Q9H5L6 903 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 FAM124BQ9H5Z6 455 aaPredicted RBP10.28□□□□□ -0.76
HDAC7-229ENST00000549883 HESX1Q9UBX0 185 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 CYTH4Q9UIA0 394 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 RASAL2Q9UJF2 1139 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 CNTN6Q9UQ52 1028 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 SH3BP1Q9Y3L3 701 aa10.28□□□□□ -0.76
HDAC7-229ENST00000549883 USP34Q70CQ2 3546 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 OTOGLQ3ZCN5 2332 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 FAM170AA1A519 330 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 KCNJ18B7U540 433 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 NFATC1O95644 943 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 ZBED1O96006 694 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 SEC13P55735 322 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 KDSRQ06136 332 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 KCNJ12Q14500 433 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 MAN2A1Q16706 1144 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 ZNF528Q3MIS6 628 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 VWA3BQ502W6 1294 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 C1orf228Q6PIY5 440 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 Q6ZNB5 142 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 HTR3DQ70Z44 454 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 DDX42Q86XP3 938 aaKnown RBP eCLIP10.27□□□□□ -0.77
HDAC7-229ENST00000549883 PHTF2Q8N3S3 785 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 DCLK2Q8N568 766 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 SUMF1Q8NBK3 374 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 ZBTB44Q8NCP5 570 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 TUBGCP2Q9BSJ2 902 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 LRRC4Q9HBW1 653 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 ZSCAN32Q9NX65 697 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 TAB2Q9NYJ8 693 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 TMEM63CQ9P1W3 806 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 TJP2Q9UDY2 1190 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 DNMT3LQ9UJW3 386 aa10.27□□□□□ -0.77
HDAC7-229ENST00000549883 EP300Q09472 2414 aaPredicted RBP10.26□□□□□ -0.77
HDAC7-229ENST00000549883 SLC9A3R1O14745 358 aaPredicted RBP10.26□□□□□ -0.77
HDAC7-229ENST00000549883 MSI1O43347 362 aaKnown RBP10.26□□□□□ -0.77
HDAC7-229ENST00000549883 LILRB5O75023 590 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 LETM1O95202 739 aaPredicted RBP10.26□□□□□ -0.77
HDAC7-229ENST00000549883 SETSIPP0DME0 302 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 RALAP11233 206 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 ADH5P11766 374 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 PRKCSHP14314 528 aaPredicted RBP10.26□□□□□ -0.77
HDAC7-229ENST00000549883 HNRNPLP14866 589 aaKnown RBP eCLIP10.26□□□□□ -0.77
HDAC7-229ENST00000549883 DRD1P21728 446 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 USP8P40818 1118 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 KLK7P49862 253 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 CCR3P51677 355 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 DAOAP59103 153 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 NR1H3Q13133 447 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 LPAL2Q16609 132 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 EXOC3L4Q17RC7 722 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 ANO4Q32M45 955 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 BSPRYQ5W0U4 402 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 KLHDC10Q6PID8 442 aa10.26□□□□□ -0.77
HDAC7-229ENST00000549883 GBP6Q6ZN66 633 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms