RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 RHOBTB1O94844 696 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 CHGBP05060 677 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 SELPP16109 830 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 NDST1P52848 882 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 KATNAL2Q8IYT4 538 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 MYO1HQ8N1T3 1032 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 TTC30BQ8N4P2 665 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 KIAA0895Q8NCT3 520 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 THAP2Q9H0W7 228 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 SEPT3Q9UH03 358 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 RAMP2O60895 175 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 ZMYND10O75800 440 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 GLRA2P23416 452 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 AP2B1P63010 937 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 CDH17Q12864 832 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 DNAJC3Q13217 504 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 TP53BP2Q13625 1128 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 KRT72Q14CN4 511 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 BRMS1LQ5PSV4 323 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 MAGEC3Q8TD91 643 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 ZNF606Q8WXB4 792 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 NCLNQ969V3 563 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 ECT2Q9H8V3 914 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 CYP4F11Q9HBI6 524 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 POLD4Q9HCU8 107 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 KCTD5Q9NXV2 234 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 CDYLQ9Y232 598 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 RBAK-RBAKDNI3L0D1 243 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 ZNF862O60290 1169 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 HMBSP08397 361 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 RARGP13631 454 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 FSTL1Q12841 308 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 MAD2L1Q13257 205 aaPredicted RBP9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 MEA1Q16626 185 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 FAM171A1Q5VUB5 890 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 POLNQ7Z5Q5 900 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 IPMKQ8NFU5 416 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 OR9Q1Q8NGQ5 310 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 REPS1Q96D71 796 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 HSD17B14Q9BPX1 270 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 RCOR3Q9P2K3 495 aaPredicted RBP9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 ARHGAP26Q9UNA1 814 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 PRPF4O43172 522 aaKnown RBP eCLIP9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 PQBP1O60828 265 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 VPS4BO75351 444 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 GRK2P25098 689 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 YY1P25490 414 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 SULT2A1Q06520 285 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 VSTM1Q6UX27 236 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 NOP9Q86U38 636 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 PSTKQ8IV42 348 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 TRIM48Q8IWZ4 208 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 TMEM161BQ8NDZ6 487 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 RXFP2Q8WXD0 754 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 ADAM2Q99965 735 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 PI4K2AQ9BTU6 479 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 NLNQ9BYT8 704 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 KRCC1Q9NPI7 259 aaPredicted RBP9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 CD274Q9NZQ7 290 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 VPS28Q9UK41 221 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 LZTS3O60299 673 aaPredicted RBP9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 USP2O75604 605 aaPredicted RBP9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 MICAL2O94851 1124 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 FARP2O94887 1054 aaPredicted RBP9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 MMP3P08254 477 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 GHRP10912 638 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 ACADMP11310 421 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 GRK3P35626 688 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 GGCXP38435 758 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 ITGA8P53708 1063 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 MAP3K7CLP57077 242 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 CNTN2Q02246 1040 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 MARC1Q5VT66 337 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 ABHD15Q6UXT9 468 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 CCDC60Q8IWA6 550 aaPredicted RBP9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 CCDC138Q96M89 665 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 PANX3Q96QZ0 392 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 LNPEPQ9UIQ6 1025 aa9.55□□□□□ -0.88
PPFIA2-216ENST00000549396 NCANO14594 1321 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 SYN3O14994 580 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 B4GALT4O60513 344 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 TRPA1O75762 1119 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 LTFP02788 710 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 VCPP55072 806 aaKnown RBP9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 CACNB2Q08289 660 aaPredicted RBP9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 SLC12A1Q13621 1099 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 PATL1Q86TB9 770 aaKnown RBP9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 PHF13Q86YI8 300 aaPredicted RBP9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 AGGF1Q8N302 714 aaeCLIP9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 DDI1Q8WTU0 396 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 TEKT4Q8WW24 435 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 ARL8AQ96BM9 186 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 DTNBP1Q96EV8 351 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 SENP8Q96LD8 212 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 MFSD14AQ96MC6 490 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 CLPBQ9H078 707 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 LATS2Q9NRM7 1088 aa9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 CHCHD3Q9NX63 227 aaKnown RBP9.54□□□□□ -0.88
PPFIA2-216ENST00000549396 DNMT3LQ9UJW3 386 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms