RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 TOR4AQ9NXH8 423 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 RAXQ9Y2V3 346 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 PCDHGB2Q9Y5G2 931 aa14.36□□□□□ -0.11
CDX2-202ENST00000548877 GOLGA4Q13439 2230 aaKnown RBP14.35□□□□□ -0.11
CDX2-202ENST00000548877 MYH10P35580 1976 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 A0A087WV48 116 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 ZNF233A6NK53 670 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 NDUFS2O75306 463 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 STAU1O95793 577 aaKnown RBP14.35□□□□□ -0.11
CDX2-202ENST00000548877 CD6P30203 668 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 WASP42768 502 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 ZNF132P52740 706 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 ANO4Q32M45 955 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 USP49Q70CQ1 688 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 HS2ST1Q7LGA3 356 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 TRAPPC11Q7Z392 1133 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 SCUBE3Q8IX30 993 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 CHPFQ8IZ52 775 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 HNRNPLLQ8WVV9 542 aaKnown RBP14.35□□□□□ -0.11
CDX2-202ENST00000548877 FBXO32Q969P5 355 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 WBP2Q969T9 261 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 INTS4Q96HW7 963 aaKnown RBP14.35□□□□□ -0.11
CDX2-202ENST00000548877 EPSTI1Q96J88 318 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 MMS19Q96T76 1030 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 SNX25Q9H3E2 840 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 PCIF1Q9H4Z3 704 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 KIAA1586Q9HCI6 787 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 WSB2Q9NYS7 404 aaPredicted RBP14.35□□□□□ -0.11
CDX2-202ENST00000548877 TBC1D7Q9P0N9 293 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 USP36Q9P275 1121 aaKnown RBP14.35□□□□□ -0.11
CDX2-202ENST00000548877 WDR35Q9P2L0 1181 aa14.35□□□□□ -0.11
CDX2-202ENST00000548877 KNTC1P50748 2209 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 KNL1Q8NG31 2342 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 PRRT4C9JH25 899 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 H3BQV1 296 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 CD2BP2O95400 341 aaKnown RBP14.34□□□□□ -0.11
CDX2-202ENST00000548877 CST3P01034 146 aaPredicted RBP14.34□□□□□ -0.11
CDX2-202ENST00000548877 CISD3P0C7P0 127 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 NUCB2P80303 420 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 CAMK2BQ13554 666 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 ENPP2Q13822 863 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 SF3A1Q15459 793 aaKnown RBP14.34□□□□□ -0.11
CDX2-202ENST00000548877 IL27RAQ6UWB1 636 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 SV2BQ7L1I2 683 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 B3GALNT2Q8NCR0 500 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 OR6B3Q8NGW1 331 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 XPO6Q96QU8 1125 aaKnown RBP14.34□□□□□ -0.11
CDX2-202ENST00000548877 CDC6Q99741 560 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 FGFBP2Q9BYJ0 223 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 DPEP3Q9H4B8 488 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 CCSER2Q9H7U1 834 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 CD93Q9NPY3 652 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 ITM2CQ9NQX7 267 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 DNAJC17Q9NVM6 304 aaKnown RBP14.34□□□□□ -0.11
CDX2-202ENST00000548877 CCDC39Q9UFE4 941 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 CHORDC1Q9UHD1 332 aaPredicted RBP14.34□□□□□ -0.11
CDX2-202ENST00000548877 FBXO10Q9UK96 956 aa14.34□□□□□ -0.11
CDX2-202ENST00000548877 SHROOM3Q8TF72 1996 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 CLDN5O00501 218 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 CER1O95813 267 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 IGLV3-19P01714 112 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 TYRP14679 529 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 MAOBP27338 520 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 BNC1Q01954 994 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 PAQR9Q6ZVX9 377 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 BRAPQ7Z569 592 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 CBWD2Q8IUF1 395 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 C1orf216Q8TAB5 229 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 SCAMP5Q8TAC9 235 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 SCFD1Q8WVM8 642 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 LRIG1Q96JA1 1093 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 TMX3Q96JJ7 454 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 KCNK16Q96T55 309 aa14.33□□□□□ -0.12
CDX2-202ENST00000548877 KLF16Q9BXK1 252 aaPredicted RBP14.33□□□□□ -0.12
CDX2-202ENST00000548877 CKAP5Q14008 2032 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 METTL12A8MUP2 240 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 E9PAM4 449 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 NPC1O15118 1278 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 FLRT2O43155 660 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 PRPF6O94906 941 aaKnown RBP14.32□□□□□ -0.12
CDX2-202ENST00000548877 C7P10643 843 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 PTMSP20962 102 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 GJB2P29033 226 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 CUL4AQ13619 759 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 GALNT15Q8N3T1 639 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 SPRYD3Q8NCJ5 442 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 ADAM32Q8TC27 787 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 TOE1Q96GM8 510 aaKnown RBP14.32□□□□□ -0.12
CDX2-202ENST00000548877 BBS2Q9BXC9 721 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 XYLT2Q9H1B5 865 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 SLC6A17Q9H1V8 727 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 GAREM1Q9H706 876 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 VRTNQ9H8Y1 702 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 IL21RQ9HBE5 538 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 TM7SF3Q9NS93 570 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 RAD54BQ9Y620 910 aa14.32□□□□□ -0.12
CDX2-202ENST00000548877 KALRNO60229 2985 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 A8MXQ7 604 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 TK2O00142 265 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 TULP1O00294 542 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms