RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 RSRC2Q7L4I2 434 aaKnown RBP16.58■□□□□ 0.24
DDX54-205ENST00000548786 KLF16Q9BXK1 252 aaPredicted RBP16.58■□□□□ 0.24
DDX54-205ENST00000548786 C2orf42Q9NWW7 574 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 TMEM63CQ9P1W3 806 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 DNMT3LQ9UJW3 386 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 DMDP11532 3685 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 E2F8A0AVK6 867 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 SLC9A3R1O14745 358 aaPredicted RBP16.57■□□□□ 0.24
DDX54-205ENST00000548786 THAP12O43422 761 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 PLA2G4AP47712 749 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 SATB1Q01826 763 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 DHCR24Q15392 516 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 CNGA2Q16280 664 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 PKDCCQ504Y2 493 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 TMEM196Q5HYL7 178 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 LY6G5CQ5SRR4 150 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 CAVIN1Q6NZI2 390 aaKnown RBP16.57■□□□□ 0.24
DDX54-205ENST00000548786 PMF1Q6P1K2 205 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 DENND1BQ6P3S1 775 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 PKN3Q6P5Z2 889 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 ADGRG2Q8IZP9 1017 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 EDEM1Q92611 657 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 CD101Q93033 1021 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 UBXN6Q9BZV1 441 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 SIX2Q9NPC8 291 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 ANO10Q9NW15 660 aa16.57■□□□□ 0.24
DDX54-205ENST00000548786 FAM170AA1A519 330 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 GTPBP10A4D1E9 387 aaKnown RBP16.56■□□□□ 0.24
DDX54-205ENST00000548786 BECN2A8MW95 431 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 TRDMT1O14717 391 aaKnown RBP16.56■□□□□ 0.24
DDX54-205ENST00000548786 GABBR2O75899 941 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 ADH5P11766 374 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 GNA15P30679 374 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 HOXC13P31276 330 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 PSEN1P49768 467 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 AMPD2Q01433 879 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 KDSRQ06136 332 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 GAB4Q2WGN9 574 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 ANO4Q32M45 955 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 DGKKQ5KSL6 1271 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 RHBDF2Q6PJF5 856 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 BHLHA9Q7RTU4 235 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 C12orf40Q86WS4 652 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 NAT16Q8N8M0 369 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 ENOX1Q8TC92 643 aaKnown RBP16.56■□□□□ 0.24
DDX54-205ENST00000548786 CLEC4CQ8WTT0 213 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 BHMTQ93088 406 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 LSM14BQ9BX40 385 aaKnown RBP16.56■□□□□ 0.24
DDX54-205ENST00000548786 MIS12Q9H081 205 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 VPS16Q9H269 839 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 ST7Q9NRC1 585 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 POLR3BQ9NW08 1133 aaPredicted RBP16.56■□□□□ 0.24
DDX54-205ENST00000548786 FANCLQ9NW38 375 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 DNAJC12Q9UKB3 198 aa16.56■□□□□ 0.24
DDX54-205ENST00000548786 ATG2BQ96BY7 2078 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 USP34Q70CQ2 3546 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 ANTXRLA6NF34 631 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 YJEFN3A6XGL0 299 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 E7ENQ6 273 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 RNF40O75150 1001 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 ADH1CP00326 375 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 OPRD1P41143 372 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 SLC6A11P48066 632 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 SEC13P55735 322 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 TYRO3Q06418 890 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 GOLGA8FQ08AF8 430 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 GOLGA8DPQ0D2H9 430 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 RAPGEF1Q13905 1077 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 STILQ15468 1287 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 CT47A1Q5JQC4 288 aaPredicted RBP16.55■□□□□ 0.24
DDX54-205ENST00000548786 BTBD8Q5XKL5 378 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 ENOSF1Q7L5Y1 443 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 TADA2BQ86TJ2 420 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 PASD1Q8IV76 773 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 SFTPA1Q8IWL2 248 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 ARHGAP18Q8N392 663 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 SLC35F5Q8WV83 523 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 PRMT8Q9NR22 394 aaPredicted RBP16.55■□□□□ 0.24
DDX54-205ENST00000548786 CLIC5Q9NZA1 410 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 MARCH2Q9P0N8 246 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 TBC1D14Q9P2M4 693 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 LSM7Q9UK45 103 aaKnown RBP16.55■□□□□ 0.24
DDX54-205ENST00000548786 CNTN6Q9UQ52 1028 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 MYOFQ9NZM1 2061 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 PIEZO1Q92508 2521 aa16.55■□□□□ 0.24
DDX54-205ENST00000548786 SLC12A8A0AV02 714 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 EEF1GP26641 437 aaKnown RBP16.54■□□□□ 0.24
DDX54-205ENST00000548786 NBL1P41271 181 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 CXCL12P48061 93 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 KLK7P49862 253 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 CCR3P51677 355 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 MESP2Q0VG99 397 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 KCNMA1Q12791 1236 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 KRT31Q15323 416 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 CDKAL1Q5VV42 579 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 HEATR6Q6AI08 1181 aaKnown RBP16.54■□□□□ 0.24
DDX54-205ENST00000548786 PM20D1Q6GTS8 502 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 TPGS1Q6ZTW0 290 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 TMEM25Q86YD3 366 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 SPEM1Q8N4L4 309 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms