RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 FAM160B1Q5W0V3 765 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 TEX2Q8IWB9 1127 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 SCUBE1Q8IWY4 988 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 FBXO16Q8IX29 292 aaPredicted RBP13.48□□□□□ -0.25
BRF1-210ENST00000547374 NLRP7Q8WX94 980 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 NKD2Q969F2 451 aaPredicted RBP13.48□□□□□ -0.25
BRF1-210ENST00000547374 R3HDMLQ9H3Y0 253 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 LACTBL1A8MY62 500 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 APOL1O14791 398 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 KRT38O76015 456 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 CALRP27797 417 aaKnown RBP13.48□□□□□ -0.25
BRF1-210ENST00000547374 SKIV2L2P42285 1042 aaKnown RBP13.48□□□□□ -0.25
BRF1-210ENST00000547374 PSEN1P49768 467 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 GBE1Q04446 702 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 SLC34A1Q06495 639 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 PPM1JQ5JR12 505 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 JADE1Q6IE81 842 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 RIPOR1Q6ZS17 1223 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 RASSF3Q86WH2 238 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 FAM131BQ86XD5 332 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 TNS4Q8IZW8 715 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 PPP4R1Q8TF05 950 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 HPDLQ96IR7 371 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 PEBP4Q96S96 227 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 AS3MTQ9HBK9 375 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 ZNF358Q9NW07 568 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 HES2Q9Y543 173 aa13.48□□□□□ -0.25
BRF1-210ENST00000547374 WDR27A2RRH5 827 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 SIGLEC16A6NMB1 481 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 E9PBE3 544 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 KLHL41O60662 606 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 NPTXRO95502 500 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 GPD1P21695 349 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 CUL3Q13618 768 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 RALGPS1Q5JS13 557 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 TTC39BQ5VTQ0 682 aaPredicted RBP13.47□□□□□ -0.25
BRF1-210ENST00000547374 ATG16L1Q676U5 607 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 DNAAF3Q8N9W5 541 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 NRG4Q8WWG1 115 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 TSPAN16Q9UKR8 245 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 APOC4-APOC2K7ER74 178 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 ATP9BO43861 1147 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 APOC2P02655 101 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 CSH1P0DML2 217 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 CSH2P0DML3 217 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 MLH1P40692 756 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 RABGGTBP53611 331 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 TFDP2Q14188 446 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 WASHC2DQ5SRD0 308 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 LPCAT4Q643R3 524 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 FAM83AQ86UY5 434 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 WDR49Q8IV35 697 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 PIP4K2CQ8TBX8 421 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 SEPT1Q8WYJ6 367 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 FGD4Q96M96 766 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 ELOVL4Q9GZR5 314 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 MINDY3Q9H8M7 445 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 RSAD1Q9HA92 442 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 ZNF214Q9UL59 606 aaPredicted RBP13.47□□□□□ -0.25
BRF1-210ENST00000547374 TM9SF1O15321 606 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 TRPA1O75762 1119 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 DESP17661 470 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 TYK2P29597 1187 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 FKBP1AP62942 108 aaKnown RBP13.47□□□□□ -0.25
BRF1-210ENST00000547374 ASPHQ12797 758 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 IFRD2Q12894 506 aaPredicted RBP13.47□□□□□ -0.25
BRF1-210ENST00000547374 NME3Q13232 169 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 GOLGA7BQ2TAP0 167 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 KIF12Q96FN5 646 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 SDCBP2Q9H190 292 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 RNPEPQ9H4A4 650 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 UBP1Q9NZI7 540 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 HESX1Q9UBX0 185 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 CORO1CQ9ULV4 474 aaPredicted RBP13.47□□□□□ -0.25
BRF1-210ENST00000547374 APOBEC2Q9Y235 224 aaKnown RBP13.47□□□□□ -0.25
BRF1-210ENST00000547374 MFHAS1Q9Y4C4 1052 aa13.47□□□□□ -0.25
BRF1-210ENST00000547374 A0A087WZ62 844 aa13.46□□□□□ -0.25
BRF1-210ENST00000547374 TRUB2O95900 331 aaKnown RBP13.46□□□□□ -0.25
BRF1-210ENST00000547374 PROCP04070 461 aa13.46□□□□□ -0.25
BRF1-210ENST00000547374 PTPRAP18433 802 aa13.46□□□□□ -0.25
BRF1-210ENST00000547374 TFE3P19532 575 aaPredicted RBP13.46□□□□□ -0.25
BRF1-210ENST00000547374 EIF4BP23588 611 aaKnown RBP13.46□□□□□ -0.25
BRF1-210ENST00000547374 MRPS35P82673 323 aaKnown RBP13.46□□□□□ -0.25
BRF1-210ENST00000547374 FAM183BPQ6ZVS7 135 aa13.46□□□□□ -0.25
BRF1-210ENST00000547374 XYLT1Q86Y38 959 aa13.46□□□□□ -0.25
BRF1-210ENST00000547374 WDR75Q8IWA0 830 aaKnown RBP13.46□□□□□ -0.25
BRF1-210ENST00000547374 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.46□□□□□ -0.259e-7■■■■■ 51.2
BRF1-210ENST00000547374 FDXACB1Q9BRP7 624 aaPredicted RBP13.46□□□□□ -0.25
BRF1-210ENST00000547374 DHX33Q9H6R0 707 aaKnown RBP13.46□□□□□ -0.25
BRF1-210ENST00000547374 DNAH12Q6ZR08 3092 aa13.46□□□□□ -0.25
BRF1-210ENST00000547374 AIM2O14862 343 aa13.46□□□□□ -0.25
BRF1-210ENST00000547374 PMM2O15305 246 aa13.46□□□□□ -0.25
BRF1-210ENST00000547374 STBD1O95210 358 aa13.46□□□□□ -0.25
BRF1-210ENST00000547374 STAG3L1P0CL83 205 aa13.46□□□□□ -0.25
BRF1-210ENST00000547374 SLC25A11Q02978 314 aaKnown RBP13.46□□□□□ -0.25
BRF1-210ENST00000547374 TRIP10Q15642 601 aa13.46□□□□□ -0.25
BRF1-210ENST00000547374 FASTKD1Q53R41 847 aaKnown RBP13.46□□□□□ -0.25
BRF1-210ENST00000547374 ALKBH8Q96BT7 664 aaKnown RBP13.46□□□□□ -0.25
BRF1-210ENST00000547374 LGMNQ99538 433 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms