RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ULK2Q8IYT8 1036 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 PPP4R1Q8TF05 950 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 TTC25Q96NG3 672 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 UBE2OQ9C0C9 1292 aaKnown RBP15.22■□□□□ 0.03
HOXC11-202ENST00000546378 B4GALT5O43286 388 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 TYROBPO43914 113 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 ANPEPP15144 967 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 MIPP30301 263 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 RAB27AP51159 221 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 BPIFB4P59827 614 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 EMC2Q15006 297 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 LRRC23Q53EV4 343 aaPredicted RBP15.22■□□□□ 0.03
HOXC11-202ENST00000546378 SLC45A4Q5BKX6 768 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 CMC1Q7Z7K0 106 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 DENND1AQ8TEH3 1009 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 NDRG1Q92597 394 aaKnown RBP15.22■□□□□ 0.03
HOXC11-202ENST00000546378 PANX3Q96QZ0 392 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 RIT2Q99578 217 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 HAPLN2Q9GZV7 340 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 SEMA6AQ9H2E6 1030 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 KRT82Q9NSB4 513 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 SLC7A8Q9UHI5 535 aa15.22■□□□□ 0.03
HOXC11-202ENST00000546378 C2CD2LO14523 706 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 SEC24DO94855 1032 aaPredicted RBP15.21■□□□□ 0.03
HOXC11-202ENST00000546378 ZWINTO95229 277 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 EDN1P05305 212 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 ENO3P13929 434 aaPredicted RBP15.21■□□□□ 0.03
HOXC11-202ENST00000546378 PDGFRAP16234 1089 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 CCR10P46092 362 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 IREB2P48200 963 aaKnown RBP15.21■□□□□ 0.03
HOXC11-202ENST00000546378 AQP4P55087 323 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 TMEM62Q0P6H9 643 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 PTPN20Q4JDL3 420 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 UTS2BQ765I0 119 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 MAP4K3Q8IVH8 894 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 MORC4Q8TE76 937 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 FAM149B1Q96BN6 582 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 CDCA5Q96FF9 252 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 CPXM1Q96SM3 734 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 PDCD2LQ9BRP1 358 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 WDR83Q9BRX9 315 aaKnown RBP15.21■□□□□ 0.03
HOXC11-202ENST00000546378 GRIP2Q9C0E4 1043 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 TMEM165Q9HC07 324 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 RNASEH1O60930 286 aaKnown RBP15.21■□□□□ 0.03
HOXC11-202ENST00000546378 HMGCRP04035 888 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 GNL1P36915 607 aaPredicted RBP15.21■□□□□ 0.03
HOXC11-202ENST00000546378 ACTR2P61160 394 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 DSG1Q02413 1049 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 GRM1Q13255 1194 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 MCF2L2Q86YR7 1114 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 B3GNT5Q9BYG0 378 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 LIN28AQ9H9Z2 209 aaKnown RBP15.21■□□□□ 0.03
HOXC11-202ENST00000546378 CYP26B1Q9NR63 512 aa15.21■□□□□ 0.03
HOXC11-202ENST00000546378 DLEC1Q9Y238 1755 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 AMHP03971 560 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 LYNP07948 512 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 AVPR1AP37288 418 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 INHBEP58166 350 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 DLG1Q12959 904 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 STX3Q13277 289 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 HIC1Q14526 733 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 TMEM132BQ14DG7 1078 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 MORF4L2Q15014 288 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 SPDYCQ5MJ68 293 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 SLC9A9Q8IVB4 645 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 SCUBE3Q8IX30 993 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 KATNAL2Q8IYT4 538 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 C12orf50Q8NA57 414 aaPredicted RBP15.21■□□□□ 0.02
HOXC11-202ENST00000546378 EPAS1Q99814 870 aa15.21■□□□□ 0.02
HOXC11-202ENST00000546378 OXCT2Q9BYC2 517 aaPredicted RBP15.21■□□□□ 0.02
HOXC11-202ENST00000546378 JPH1Q9HDC5 661 aaPredicted RBP15.21■□□□□ 0.02
HOXC11-202ENST00000546378 SIPA1L1O43166 1804 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 PSTPIP1O43586 416 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 FOXD2O60548 495 aaPredicted RBP15.2■□□□□ 0.02
HOXC11-202ENST00000546378 BCAR1P56945 870 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 DPYSL3Q14195 570 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 NRF1Q16656 503 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 TNFAIP8L3Q5GJ75 292 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 FOXR2Q6PJQ5 311 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 CEP128Q6ZU80 1094 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.2■□□□□ 0.02
HOXC11-202ENST00000546378 CLEC4DQ8WXI8 215 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 FAM136AQ96C01 138 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 STK24Q9Y6E0 443 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 CITO14578 2027 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 A6NHS1 94 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 ALOX15BO15296 676 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 LRCH4O75427 683 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 SUPT3HO75486 399 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 CSPG5O95196 566 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 ETFBP38117 255 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 MLH1P40692 756 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 CDKN2BP42772 138 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 AP2B1P63010 937 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 ITGA9Q13797 1035 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 GK3PQ14409 553 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 KLHL38Q2WGJ6 581 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 GLRA4Q5JXX5 417 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 TAS1R3Q7RTX0 852 aa15.2■□□□□ 0.02
HOXC11-202ENST00000546378 ATP6V0A1Q93050 837 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms