RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 POU2F3Q9UKI9 436 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 ASTN2O75129 1339 aaPredicted RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 SLC16A4O15374 487 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 HNRNPCL1O60812 293 aaKnown RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 CHRNB1P11230 501 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 DPEP1P16444 411 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 CA4P22748 312 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 PPARGP37231 505 aaPredicted RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 ADAM17P78536 824 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 MRPS9P82933 396 aaKnown RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 KRT17Q04695 432 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 SPARCL1Q14515 664 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 EFTUD2Q15029 972 aaKnown RBP eCLIP8.17□□□□□ -1.1
UBR1-202ENST00000546274 TLR1Q15399 786 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 PCSK7Q16549 785 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 SNRNP35Q16560 246 aaKnown RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 DALRD3Q5D0E6 543 aaKnown RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 TMEM63BQ5T3F8 832 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 SPOPLQ6IQ16 392 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 RNF19BQ6ZMZ0 732 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 TRMT10CQ7L0Y3 403 aaKnown RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 AMIGO2Q86SJ2 522 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 DHDDSQ86SQ9 333 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 GRAMD2AQ8IUY3 354 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 CPNE9Q8IYJ1 553 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 Q8N9G6 341 aaPredicted RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 CLEC4DQ8WXI8 215 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 PTCD3Q96EY7 689 aaKnown RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 PWWP2AQ96N64 755 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 AGO4Q9HCK5 861 aaKnown RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 TOPORSQ9NS56 1045 aaPredicted RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 WHRNQ9P202 907 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 RSL24D1Q9UHA3 163 aaKnown RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 GPSM3Q9Y4H4 160 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 TCP10L2B9ZVM9 353 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 J3QRK9 145 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 NFIBO00712 420 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 THAP12O43422 761 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 SPOPO43791 374 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 LYPLA2O95372 231 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 RBP3P10745 1247 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 PHKA2P46019 1235 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 GPC3P51654 580 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 C21orf59P57076 290 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 YWHAGP61981 247 aaKnown RBP eCLIP8.17□□□□□ -1.1
UBR1-202ENST00000546274 CALCOCO2Q13137 446 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 HNRNPDQ14103 355 aaKnown RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 PSMD6Q15008 389 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 SLC39A4Q6P5W5 647 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 OSTM1Q86WC4 334 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 REM2Q8IYK8 340 aaPredicted RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 ANKRD35Q8N283 1001 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 GSTCDQ8NEC7 633 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 SUN5Q8TC36 379 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 ATG4AQ8WYN0 398 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 FBXL8Q96CD0 374 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 CCDC124Q96CT7 223 aaKnown RBP8.17□□□□□ -1.1
UBR1-202ENST00000546274 RBM15Q96T37 977 aaKnown RBP eCLIP8.17□□□□□ -1.1
UBR1-202ENST00000546274 EHMT1Q9H9B1 1298 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 MAN1C1Q9NR34 630 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 GIN1Q9NXP7 522 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 THEGQ9P2T0 379 aa8.17□□□□□ -1.1
UBR1-202ENST00000546274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.17□□□□□ -1.1
UBR1-202ENST00000546274 COL4A5P29400 1685 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 C2CD2LO14523 706 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 VDRP11473 427 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 UNGP13051 313 aaPredicted RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 YWHABP31946 246 aaKnown RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 MFAP3P55082 362 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 CRY1Q16526 586 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 PHKG1Q16816 387 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 TKFCQ3LXA3 575 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 RABGAP1LQ5R372 815 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 MAP3K21Q5TCX8 1036 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 ACAD10Q6JQN1 1059 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 TMC7Q7Z402 723 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 ERI1Q8IV48 349 aaKnown RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 PASD1Q8IV76 773 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 TRIML2Q8N7C3 387 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 TAS1R2Q8TE23 839 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 KIFC3Q9BVG8 833 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 GPRC5DQ9NZD1 345 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 SLC7A8Q9UHI5 535 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 ADAMTS6Q9UKP5 1117 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 GRID1Q9ULK0 1009 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 UBIAD1Q9Y5Z9 338 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 A0A1B0GTW7 788 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 TMCC2O75069 709 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 CSPG5O95196 566 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 UBL4AP11441 157 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 CAP2P40123 477 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 ARL1P40616 181 aaPredicted RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 QARSP47897 775 aaKnown RBP8.16□□□□□ -1.1
UBR1-202ENST00000546274 PEX3P56589 373 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 PTK6Q13882 451 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 CLEC16AQ2KHT3 1053 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 KAZNQ674X7 775 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 KRT39Q6A163 491 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 LLGL2Q6P1M3 1020 aa8.16□□□□□ -1.1
UBR1-202ENST00000546274 XKR5Q6UX68 686 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms