RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 TBX2Q13207 712 aaPredicted RBP21.47■■□□□ 1.03
HMGA2-211ENST00000545998 ARID5BQ14865 1188 aa21.47■■□□□ 1.03
HMGA2-211ENST00000545998 CLEC16AQ2KHT3 1053 aa21.47■■□□□ 1.03
HMGA2-211ENST00000545998 HGSNATQ68CP4 663 aa21.47■■□□□ 1.03
HMGA2-211ENST00000545998 ZNF571Q7Z3V5 609 aaPredicted RBP21.47■■□□□ 1.03
HMGA2-211ENST00000545998 TMC6Q7Z403 805 aa21.47■■□□□ 1.03
HMGA2-211ENST00000545998 TADA2BQ86TJ2 420 aa21.47■■□□□ 1.03
HMGA2-211ENST00000545998 ERICH1Q86X53 443 aa21.47■■□□□ 1.03
HMGA2-211ENST00000545998 RIN3Q8TB24 985 aa21.47■■□□□ 1.03
HMGA2-211ENST00000545998 IPO4Q8TEX9 1081 aaKnown RBP21.47■■□□□ 1.03
HMGA2-211ENST00000545998 ZFRQ96KR1 1074 aaKnown RBP21.47■■□□□ 1.03
HMGA2-211ENST00000545998 CDK5RAP1Q96SZ6 601 aaKnown RBP21.47■■□□□ 1.03
HMGA2-211ENST00000545998 NUDT5Q9UKK9 219 aa21.47■■□□□ 1.03
HMGA2-211ENST00000545998 CPQQ9Y646 472 aa21.47■■□□□ 1.03
HMGA2-211ENST00000545998 LTFP02788 710 aa21.46■■□□□ 1.03
HMGA2-211ENST00000545998 MBL2P11226 248 aaPredicted RBP21.46■■□□□ 1.03
HMGA2-211ENST00000545998 SKILP12757 684 aa21.46■■□□□ 1.03
HMGA2-211ENST00000545998 TCF3P15923 654 aa21.46■■□□□ 1.03
HMGA2-211ENST00000545998 ATP5C1P36542 298 aaKnown RBP21.46■■□□□ 1.03
HMGA2-211ENST00000545998 C10orf120Q5SQS8 335 aa21.46■■□□□ 1.03
HMGA2-211ENST00000545998 BTBD8Q5XKL5 378 aa21.46■■□□□ 1.03
HMGA2-211ENST00000545998 DEPDC1BQ8WUY9 529 aa21.46■■□□□ 1.03
HMGA2-211ENST00000545998 KHSRPQ92945 711 aaKnown RBP eCLIP21.46■■□□□ 1.032e-8■■□□□ 14.3
HMGA2-211ENST00000545998 PIWIL1Q96J94 861 aaKnown RBP21.46■■□□□ 1.03
HMGA2-211ENST00000545998 NACA2Q9H009 215 aa21.46■■□□□ 1.03
HMGA2-211ENST00000545998 SYNCQ9H7C4 482 aa21.46■■□□□ 1.03
HMGA2-211ENST00000545998 ABCC13Q9NSE7 274 aa21.46■■□□□ 1.03
HMGA2-211ENST00000545998 SEPT11Q9NVA2 429 aaKnown RBP21.46■■□□□ 1.03
HMGA2-211ENST00000545998 BZW2Q9Y6E2 419 aaKnown RBP21.46■■□□□ 1.03
HMGA2-211ENST00000545998 FAM170AA1A519 330 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 PSMC3P17980 439 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 TNFAIP3P21580 790 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 HNRNPH3P31942 346 aaKnown RBP21.45■■□□□ 1.02
HMGA2-211ENST00000545998 CENPCQ03188 943 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 FCHO2Q0JRZ9 810 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 USP4Q13107 963 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 GRM2Q14416 872 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 ZNF77Q15935 545 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 OLFML1Q6UWY5 402 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 FAM183BPQ6ZVS7 135 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 SLC30A5Q8TAD4 765 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 BPIFB1Q8TDL5 484 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 EDEM1Q92611 657 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 C18orf8Q96DM3 657 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 DNAJC7Q99615 494 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 SMOC2Q9H3U7 446 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 SMPD4Q9NXE4 827 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 DNMT3LQ9UJW3 386 aa21.45■■□□□ 1.02
HMGA2-211ENST00000545998 LEFTY2O00292 366 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 MDM4O15151 490 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 NARSO43776 548 aaKnown RBP21.44■■□□□ 1.02
HMGA2-211ENST00000545998 MFAP3LO75121 409 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 SERPING1P05155 500 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 FYNP06241 537 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 TPM1P09493 284 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 MMP8P22894 467 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 MSANTD4Q8NCY6 345 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 OR8K1Q8NGG5 319 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 SH3RF2Q8TEC5 729 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 GOLGA1Q92805 767 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 KLF16Q9BXK1 252 aaPredicted RBP21.44■■□□□ 1.02
HMGA2-211ENST00000545998 DUSP12Q9UNI6 340 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 GOLGA8FQ08AF8 430 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 GOLGA8DPQ0D2H9 430 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 C2CD6Q53TS8 623 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 OR6B2Q6IFH4 312 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 RSRC2Q7L4I2 434 aaKnown RBP21.44■■□□□ 1.02
HMGA2-211ENST00000545998 BEND5Q7L4P6 421 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 XYLT1Q86Y38 959 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 ZDHHC17Q8IUH5 632 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 FAM149B1Q96BN6 582 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 TRMT61BQ9BVS5 477 aaKnown RBP21.44■■□□□ 1.02
HMGA2-211ENST00000545998 OLA1Q9NTK5 396 aaKnown RBP21.44■■□□□ 1.02
HMGA2-211ENST00000545998 ASNSD1Q9NWL6 643 aa21.44■■□□□ 1.02
HMGA2-211ENST00000545998 GLI1P08151 1106 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 SRFP11831 508 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 NSFP46459 744 aaKnown RBP21.43■■□□□ 1.02
HMGA2-211ENST00000545998 ADKP55263 362 aaKnown RBP21.43■■□□□ 1.02
HMGA2-211ENST00000545998 YWHAZP63104 245 aaKnown RBP21.43■■□□□ 1.02
HMGA2-211ENST00000545998 GPC5P78333 572 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 SLC6A3Q01959 620 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 EFEMP1Q12805 493 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 PTP4A2Q12974 167 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 TAF5Q15542 800 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 MMS22LQ6ZRQ5 1243 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 DDX42Q86XP3 938 aaKnown RBP eCLIP21.43■■□□□ 1.02
HMGA2-211ENST00000545998 PHF13Q86YI8 300 aaPredicted RBP21.43■■□□□ 1.02
HMGA2-211ENST00000545998 DRC7Q8IY82 874 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 UBALD2Q8IYN6 164 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 RNF139Q8WU17 664 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 TRIM62Q9BVG3 475 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 GKN1Q9NS71 199 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 ABHD10Q9NUJ1 306 aa21.43■■□□□ 1.02
HMGA2-211ENST00000545998 TNFRSF10AO00220 468 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 DDX3XO00571 662 aaKnown RBP eCLIP21.42■■□□□ 1.02
HMGA2-211ENST00000545998 DCXO43602 365 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 GDI1P31150 447 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 ZXDAP98168 799 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 MTF1Q14872 753 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 TDRD12Q587J7 1177 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms