RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	PSTPIP1	O43586	416 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CLASP2	O75122	1294 aa	Known RBP	10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	F9	P00740	461 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	C8A	P07357	584 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	KRT7	P08729	469 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	SPATA31D3	P0C874	917 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	GBP1	P32455	592 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CTNNA1	P35221	906 aa	Known RBP	10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	PCK1	P35558	622 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CETN2	P41208	172 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	PPP3CC	P48454	512 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	SULT1E1	P49888	294 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	DNA2	P51530	1060 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CLCN4	P51793	760 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	RWDD2B	P57060	319 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	USP46	P62068	366 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	ZNF252P-AS1	Q0IIN9	211 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	TAF10	Q12962	218 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	MTMR3	Q13615	1198 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CAMK1	Q14012	370 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CDO1	Q16878	200 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	C15orf59	Q2T9L4	293 aa	Predicted RBP	10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	PPM1L	Q5SGD2	360 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	ZFYVE27	Q5T4F4	411 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	LRRC38	Q5VT99	294 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	TRNP1	Q6NT89	227 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	SPATA31D4	Q6ZUB0	917 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	RSRC2	Q7L4I2	434 aa	Known RBP	10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	STRADA	Q7RTN6	431 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	BHLHA9	Q7RTU4	235 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	TADA2B	Q86TJ2	420 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	STKLD1	Q8NE28	680 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	GDPD5	Q8WTR4	605 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	FAM172A	Q8WUF8	416 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	HDAC7	Q8WUI4	952 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	EDEM1	Q92611	657 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	PBK	Q96KB5	322 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	ZNF512	Q96ME7	567 aa	Predicted RBP	10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	TLE6	Q9H808	572 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	OLA1	Q9NTK5	396 aa	Known RBP	10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	DDX56	Q9NY93	547 aa	Known RBP	10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CLIC5	Q9NZA1	410 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	GMIP	Q9P107	970 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	NAALADL1	Q9UQQ1	740 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831	PCDHA3	Q9Y5H8	950 aa		10.49	□□□□□ -0.73
NPIPA1-208	ENST00000545831		A0A1W2PQH9	124 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	SPDYE4	A6NLX3	237 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831		M0QYT0	321 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CES2	O00748	559 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	KCNK3	O14649	394 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	PRPSAP2	O60256	369 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	LRCH4	O75427	683 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	ZMYND10	O75800	440 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	FYN	P06241	537 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	RDX	P35241	583 aa	Known RBP	10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	PAFAH1B1	P43034	410 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	DEUP1	Q05D60	604 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	PABPC1L	Q4VXU2	614 aa	Known RBP	10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	SYPL2	Q5VXT5	272 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	SCYL2	Q6P3W7	929 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	SND1	Q7KZF4	910 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	SCD5	Q86SK9	330 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	SLC22A17	Q8WUG5	538 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CENPI	Q92674	756 aa	Predicted RBP	10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CD101	Q93033	1021 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	NT5C3B	Q969T7	300 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	PSMG2	Q969U7	264 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	TRMT2B	Q96GJ1	504 aa	Known RBP	10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	MYRFL	Q96LU7	910 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	OSBPL9	Q96SU4	736 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CDK5RAP1	Q96SZ6	601 aa	Known RBP	10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	TBCB	Q99426	244 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	NPY6R	Q99463	290 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CDCA3	Q99618	268 aa	Predicted RBP	10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	PRO3102	Q9H379	93 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	TRPM5	Q9NZQ8	1165 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	PCSK1N	Q9UHG2	260 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	USP18	Q9UMW8	372 aa		10.48	□□□□□ -0.73
NPIPA1-208	ENST00000545831	GBF1	Q92538	1859 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	PER2	O15055	1255 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	FANCG	O15287	622 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	DDX3Y	O15523	660 aa	Known RBP	10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	XYLB	O75191	536 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	ENDOD1	O94919	500 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	TRUB2	O95900	331 aa	Known RBP	10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	HNRNPA1	P09651	372 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	RARG	P13631	454 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	HMGA1	P17096	107 aa	Known RBP	10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	MIP	P30301	263 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	HOXA9	P31269	272 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	GJC1	P36383	396 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	TAS2R40	P59535	323 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	NME3	Q13232	169 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CLUL1	Q15846	466 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	LRIT3	Q3SXY7	679 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	BOLA3	Q53S33	107 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	SEL1L2	Q5TEA6	688 aa		10.47	□□□□□ -0.73
NPIPA1-208	ENST00000545831	CCDC181	Q5TID7	509 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms