RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 SPATA18Q8TC71 538 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 CCHCR1Q8TD31 782 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 KBTBD7Q8WVZ9 684 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 C1orf54Q8WWF1 131 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 PKNOX2Q96KN3 472 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 SENP8Q96LD8 212 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 HSFY1Q96LI6 401 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 CCDC114Q96M63 670 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 UROC1Q96N76 676 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 SLITRK1Q96PX8 696 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 ADAM2Q99965 735 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 C2orf49Q9BVC5 232 aaPredicted RBP7.37□□□□□ -1.23
SPPL3-209ENST00000545209 FRMD8P1Q9BZ68 369 aaPredicted RBP7.37□□□□□ -1.23
SPPL3-209ENST00000545209 TRIM31Q9BZY9 425 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 DCLK3Q9C098 648 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 AGO3Q9H9G7 860 aaKnown RBP7.37□□□□□ -1.23
SPPL3-209ENST00000545209 RSAD1Q9HA92 442 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 GOLGA2P5Q9HBQ8 144 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 TRMT13Q9NUP7 481 aaKnown RBP7.37□□□□□ -1.23
SPPL3-209ENST00000545209 RNF19AQ9NV58 838 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 SAGE1Q9NXZ1 904 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 TJP2Q9UDY2 1190 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 ASIC3Q9UHC3 531 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 NOVA2Q9UNW9 492 aaKnown RBP7.37□□□□□ -1.23
SPPL3-209ENST00000545209 EFR3BQ9Y2G0 817 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 GPC6Q9Y625 555 aaPredicted RBP7.37□□□□□ -1.23
SPPL3-209ENST00000545209 TRIP11Q15643 1979 aa7.37□□□□□ -1.23
SPPL3-209ENST00000545209 hCG_1818297A0A087WSY0 165 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 A0A1W2PQ45 241 aaPredicted RBP7.36□□□□□ -1.23
SPPL3-209ENST00000545209 A0A1W2PQY0 241 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 GOLGA6L10A6NI86 522 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 C2CD4BA6NLJ0 364 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 GOLGA8KD6RF30 607 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 PI4K2BG5E9Z4 385 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 NDC80O14777 642 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 XPO1O14980 1071 aaKnown RBP7.36□□□□□ -1.23
SPPL3-209ENST00000545209 POLR3GO15318 223 aaPredicted RBP7.36□□□□□ -1.23
SPPL3-209ENST00000545209 PRPSAP2O60256 369 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 LRCH4O75427 683 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 FAM153BP0C7A2 387 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 FGFR1P11362 822 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 ODC1P11926 461 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 CCDC130P13994 396 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 ATF2P15336 505 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 PDGFRAP16234 1089 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 PTPN1P18031 435 aaKnown RBP7.36□□□□□ -1.23
SPPL3-209ENST00000545209 FGFR3P22607 806 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 IGFBP4P22692 258 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 PCSK1P29120 753 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 SDC4P31431 198 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 RDXP35241 583 aaKnown RBP7.36□□□□□ -1.23
SPPL3-209ENST00000545209 MAP2K3P46734 347 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 SCNN1GP51170 649 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 CAP1Q01518 475 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 SLC6A3Q01959 620 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 SLC25A11Q02978 314 aaKnown RBP7.36□□□□□ -1.23
SPPL3-209ENST00000545209 CAV1Q03135 178 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 KRT17Q04695 432 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 PDE4CQ08493 712 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 KLF1Q13351 362 aaPredicted RBP7.36□□□□□ -1.23
SPPL3-209ENST00000545209 SNX1Q13596 522 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 PTK6Q13882 451 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 ELOAQ14241 798 aaKnown RBP7.36□□□□□ -1.23
SPPL3-209ENST00000545209 LLGL1Q15334 1064 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 FAM153CQ494X1 144 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 SPDYCQ5MJ68 293 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 ZNF618Q5T7W0 954 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 SAMD5Q5TGI4 173 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 WSCD1Q658N2 575 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 KAZNQ674X7 775 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 PMF1Q6P1K2 205 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 TTC27Q6P3X3 843 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 LYPD4Q6UWN0 246 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 GLB1LQ6UWU2 654 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 OLFML1Q6UWY5 402 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 MFSD7Q6UXD7 560 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 AGMOQ6ZNB7 445 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 FAM43BQ6ZT52 329 aaPredicted RBP7.36□□□□□ -1.23
SPPL3-209ENST00000545209 CEP128Q6ZU80 1094 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 GSTA5Q7RTV2 222 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 TMEM110Q86TL2 294 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 DDX42Q86XP3 938 aaKnown RBP eCLIP7.36□□□□□ -1.23
SPPL3-209ENST00000545209 MAP7D3Q8IWC1 876 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 SVOPQ8N4V2 548 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 EMC1Q8N766 993 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 CCDC89Q8N998 374 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 KCTD6Q8NC69 237 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 BBOF1Q8ND07 529 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 URGCPQ8TCY9 931 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 SLC2A14Q8TDB8 520 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 SLC35F5Q8WV83 523 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 RXFP2Q8WXD0 754 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 ATG4AQ8WYN0 398 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 LPPQ93052 612 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 HNRNPABQ99729 332 aaKnown RBP7.36□□□□□ -1.23
SPPL3-209ENST00000545209 MED10Q9BTT4 135 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 HEMGNQ9BXL5 484 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 PHACTR1Q9C0D0 580 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 TSPYL1Q9H0U9 437 aa7.36□□□□□ -1.23
SPPL3-209ENST00000545209 DPEP3Q9H4B8 488 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms